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We have found 463 datasets for the keyword " biota". You can continue exploring the search results in the list below.
Datasets: 106,091
Contributors: 42
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463 Datasets, Page 1 of 47
Shorezone Biobanding Polygons
The Shorezone Biobanding Polygons are an area representation of the various types of biota (flora and fauna) and their distribution, or lack thereof, found in the shoreunit.
Shorezone Biobanding Lines
The Shorezone Biobanding Lines are a linear representation of the various types of biota (flora and fauna) and their distribution, or lack thereof, found in the shoreunit.
Barren-ground caribou - wildlife key area - 250k
Wildlife Key Areas (WKA) are locations used by wildlife for critical, seasonal life functions. WKAs are identified by interpreting observed locations of wildlife at key times of year, not through intensive habitat assessment. Polygons derived from interviews with locals and from GIS interpretation of wildlife/habitat surveys. GIS interpretation follows criteria specific for taxon and/or populations of taxon. Key Areas are based on observed locations of wildlife at key times of year, not on habitat assessment. With new information, boundaries and designations of Key Areas can change and additional Key Areas can be identified. Furthermore, Key Areas are not the only sites important for wildlife. Other information sources can identify other sites important for wildlife for reasons outside the scope of the WKA Inventory Program. Updates to Key Areas occur only periodically. For the most current information, please consult with the Regional Biologist for your area of interest. If you have questions or would like to contribute to the WKA database, please contact the WKA Inventory Program ( [wka@yukon.ca](mailto:wka@yukon.ca) ).Distributed from [GeoYukon](https://mapservices.gov.yk.ca/GeoYukon/) by the [Government of Yukon](https://yukon.ca) . Discover more digital map data and interactive maps from Yukon's digital map data collection.For more information: [geomatics.help@yukon.ca](mailto:geomatics.help@yukon.ca)
Sharp-tailed Grouse - Wildlife Key Area - 250k
Wildlife Key Areas (WKA) are locations used by wildlife for critical, seasonal life functions. WKAs are identified by interpreting observed locations of wildlife at key times of year, not through intensive habitat assessment. Polygons derived from interviews with locals and from GIS interpretation of wildlife/habitat surveys. GIS interpretation follows criteria specific for taxon and/or populations of taxon. Key Areas are based on observed locations of wildlife at key times of year, not on habitat assessment. With new information, boundaries and designations of Key Areas can change and additional Key Areas can be identified. Furthermore, Key Areas are not the only sites important for wildlife. Other information sources can identify other sites important for wildlife for reasons outside the scope of the WKA Inventory Program. Updates to Key Areas occur only periodically. For the most current information, please consult with the Regional Biologist for your area of interest. If you have questions or would like to contribute to the WKA database, please contact the WKA Inventory Program ( [wka@yukon.ca](mailto:wka@yukon.ca) ).Distributed from [GeoYukon](https://mapservices.gov.yk.ca/GeoYukon/) by the [Government of Yukon](https://yukon.ca/) . Discover more digital map data and interactive maps from Yukon's digital map data collection.For more information: [geomatics.help@yukon.ca](mailto:geomatics.help@yukon.ca)
CABIN Canadian Aquatic Biomonitoring Network
The Canadian Aquatic Biomonitoring Network (CABIN) is an aquatic biomonitoring program for assessing the health of fresh water ecosystems in Canada. Benthic macroinvertebrates are collected at a site location and their counts are used as an indicator of the health of that water body. CABIN is based on the network of networks approach that promotes inter-agency collaboration and data-sharing to achieve consistent and comparable reporting on fresh water quality and aquatic ecosystem conditions in Canada. The program is maintained by Environment and Climate Change Canada (ECCC) to support the collection, assessment, reporting and distribution of biological monitoring information. A set of nationally standardized CABIN protocols are used for field collection, laboratory work, and analysis of biological monitoring data. A training program is available to certify participants in the standard protocols. There are two types of sites in the CABIN database (reference and test). Reference sites represent habitats that are closest to “natural” before any human impact. The data from reference sites are used to create reference models that CABIN partners use to evaluate their test sites in an approach known as the Reference Condition Approach (RCA). Using the RCA models, CABIN partners match their test sites to groups of reference sites on similar habitats and compare the observed macroinvertebrate communities. The extent of the differences between the test site communities and the reference site communities allows CABIN partners to estimate the severity of the impacts at those locations. CABIN samples have been collected since 1987 and are organized in the database by study (partner project). The data is delineated by the 11 major drainage areas (MDA) found in Canada and each one has a corresponding study, habitat and benthic invertebrate data file. Links to auxiliary water quality data are provided when available. Visits may be conducted at the same location over time with repeat site visits being identified by identical study name / site code with different dates. All data collected by the federal government is available on Open Data and more partners are adding their data continually. The csv files are updated monthly. Contact the CABIN study authority to request permission to access non open data.
A Survey of Literature on Oil Spill Effects on Marine Organisms on the West Coast of British Columbia, Canada With a Focus on Bitumen Related Products
A literature review, focusing on oil sand products (e.g., diluted bitumen), diluents, spill-treating agents, and crude oil toxicology and ecological studies, relevant to the northeast Pacific was compiled as part of the Government of Canada’s World Class Tanker Safety program. Of the 763 references identified, 14 involved diluted bitumen and other heavy crude oils, indicating the need for further research of these products in the marine environment. Diluent research suggests relatively fast evaporation and dispersion times for this component, however high toxicities may pose a threat to marine biota. Historical studies indicate older dispersant formulations had potential ecological implications, therefore newer formulations, which have not been studied in detail, require full assessment. Consistent utilization of toxicology standards remains elusive, hindering species sensitivity analyses. Exxon Valdez literature demonstrates highly variable impacts from a single oil type and the need for baseline data, recovery status, and suitable ecological end-point determination.
Biologic and Ecologic
BiologicEcologic ISO Feature Dataset symbolization and publication. September 5, 2017.
Integrating Gut Microbiota and Population Genomics in White Hake (Urophycis tenuis): Supporting Data
PURPOSE:The purpose of this work was to determine (1) how the population genomic structure relates to gut microbiota composition of White Hake (Urophycis tenuis), and (2) whether microbiota community variation provides complementary insights into population structure of this species in eastern Canada.DESCRIPTION:Integrating host-associated microbiota with genomic approaches offers an opportunity to better understand the multiple biological dimensions shaping population structure in marine fishes. A clear understanding of population structure and dynamics is essential for informed fisheries management and conservation decisions; however, while genomic approaches have greatly improved our ability to delineate biological populations, they provide only a partial representation of biological structure, as patterns of differentiation reflect both historical divergence and contemporary ecological conditions. Host-associated microbiota can influence population-level ecological processes by contributing functional, potentially heritable variation that shapes host phenotype and fitness.In this study, we combined genotyping-by-sequencing with 16S rRNA gene amplicon sequencing to examine how population genomic structure relates to gut microbiota composition and to evaluate whether microbiota community variation provides complementary insights into population structure in White Hake (Urophycis tenuis) in eastern Canada. Genomic analyses identified two populations with greater spatial overlap than previously reported. Variation partitioning revealed that host genetics explained a negligible proportion of microbiota variation compared to environmental factors and fish length, suggesting that ontogenetic shifts in habitat use and resource acquisition influence gut microbiota composition. Several taxa were differentially abundant among fish length categories used as a proxy for diet, including taxa with chitin-degrading potential such as Photobacterium and Lachnospirales, which were enriched in smaller fish known to consume a crustacean-dominated diet. Together, these results indicate that gut microbiota composition in White Hake primarily reflects ecological and life-history processes rather than host population structure. PARAMETERS COLLECTED:Environmental parameters were also collected at most sampling sites, including depth, water temperature, oxygen and salinity levels.PHYSICAL SAMPLE DETAILS:Fin samples were collected to characterize the fish genotypes. Intestine (rectum) samples were collected to study fish gut microbiome.SAMPLING METHODS:In 2022 and 2023, White Hake were sampled during Fisheries and Oceans Canada (DFO) annual bottom trawl ecosystem monitoring surveys.USE LIMITATION:To ensure scientific integrity and appropriate use of the data, we would encourage you to contact the data custodian.
Development of a coastal species characterization approach using environmental DNA (eDNA) using the marker COI
Species characterization by environmental DNA (eDNA) is a method that allows the use of DNA released into the environment by organisms from various sources (secretions, faeces, gametes, tissues, etc.). It is a complementary tool to standard sampling methods for the identification of biodiversity. This project provides a list of invertebrates species whose DNA has been detected in water samples collected at 2018 using the marker COI.The surveys were carried out in the summer of 2018 from August 11 to 14, between Forestville and Godbout (Haute-Côte-Nord). Sampling was carried out between 9-52 meters depth in 40 stations with one sample par station. Two liters of water were filtered through a 1.2 µm fiberglass filter. DNA extractions were performed with the DNeasy Blood and Tissue extraction kit (Qiagen). Negative field, extraction and PCR controls were added at the different stages of the protocol. Libraries at the COI locus were prepared by Genome Quebec and sequenced on an Illumina MiSeq PE250 system. The bioinformatics analysis of the sequences obtained was carried out using an in-house analysis pipeline as reported in Bourret et al. 2022. A first step made it possible to obtain a molecular operational taxonomic unit table (MOTU) using the cutadapt software for the removal of the adapters and the DADA2 R package for the filtration, fusion, chimera removal and data compilation. The MOTUs table was subsequently corrected by taking into account the negative controls, where the number of observations in the latter was removed from the linked samples. Singleton MOTUs have also been removed. Finally, the taxonomic assignments were carried out on the MOTUs using the IDTAXA classifier (present in the DECIPHIER R package) using a training set trained on the COI reference bank for Golf St-Laurent (GSL-rl v1.0, https://github.com/GenomicsMLI-DFO/MLI_GSL-rl) and a threshold of 40. Detections with an “Unreliable due to gaps” category were reported at the genus level only.The file provided includes generic activity information, including site, station name, date, marker type, assignment types used for taxa identification, and a list of taxa or species. The list of taxa has been verified by a biodiversity expert from the Maurice-Lamontagne Institute.This project was funded by Fisheries and Oceans Canada's Coastal Environmental Baseline Data Program under the Oceans Protection Plan. This initiative aims to acquire baseline environmental data that contributes to the characterization of significant coastal areas and supports evidence-based assessments and management decisions to preserve marine ecosystems.Data are also available on SLGO platform : https://doi.org/10.26071/ogsl-cd4c205b-f63b
Zooplankton Database
Zooplankton and ichthyoplankton data are archived in the Institute of Ocean Sciences (IOS) Zooplankton Database. The data available spans from 1980 to 2018 and is an extraction of vertical net hauls as biomass by major taxa collected during surveys conducted in the oceanic and coastal waters of the Northeast Pacific Ocean. The majority of vertical net hauls in this data set were collected from 10 metres above the sea floor or an approximate maximum depth of 250 metres. For further data requests, please use the contact information provided.
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