Funded through DFO's Strategic Program for Ecosystem-based Research and Advice (SPERA), this benthic survey covers several seabed areas adjacent to Deer Island and Campobello Island, the Wolves Islands, and Grand Manan (NB) over a two-year study period (2016-2017). One hundred and fifty drift camera transects were completed within the ~91 sq-km study region collecting continuous high-definition video with periodic 4K resolution video (provided by a downward facing Blackmagic Production Camera 4K equipped with video lights). A Nikon D800 36.1 megapixel digital still imagery camera (equipped with a studio strobe light) captured seafloor images at ~30s intervals over a maximum 25-minute drift survey period. The camera was triggered by lowering the camera frame within 1 m of the seabed, releasing tension on a trigger weight suspended below the frame. Camera location was tracked using an ultra-short baseline acoustic positioning system (Tracklink 1500HA transceiver with 1505B transponder on the camera frame). Species presence/absence, abundance, and bottom type was recorded manually using PhotoQuad v1.4 software. An average field of view of 0.7 x 0.5 m was determined from a subset of digital still images within which the 10 cm diameter trigger weight was fully in view. Thirty-eight key and common species were described using explicit taxonomic identifiers, while other species were recorded within broader general categories (e.g. unidentified Cnidaria). Identification was made to the lowest possible taxonomic level. Primary bottom-type was defined as the grain size with the most percent coverage for each image/video interval. Grain size limits were determined using the Wentworth scale.Cite this data as: Lawton P. Benthic Species Presence/Absence in the Lower Bay of Fundy Derived From High Resolution Video and Still Imagery. Published May 2022. Coastal Ecosystems Science Division, Fisheries and Oceans Canada, Dartmouth, N.S.

The data in this dataset represent an amalgamation of sea turtle sighting, stranding, and entrapment events, mainly near Newfoundland and Labrador (NL), Canada.This document summarises the detection events data for Leatherback (Dermochelys coriacea), Loggerhead (Caretta caretta), and Green (Chelonia mydas) Turtles that has been collected from opportunistic and systematic survey sources, plus stranding and entrapment records, in the waters of NL from 1946 to 2023. To a much lesser extent there are also detection records for the southern Gulf of St. Lawrence. Scotian Shelf, and northeastern U.S. waters.These detection records are mostly derived from opportunistic reports, so there are rarely data for a report that includes measures of the observer effort expended to make the detection, and rarely associated imagery. During DFO aerial surveys there are measures of effort in most cases, enabling the turtle sightings reports to be used in habitat modelling (e.g., Mosnier et al. 2018).Most of the information variables (such as “Date”, “Latitude”, “Longitude”, “Number of Animals”) have been obtained from the detection report. In some cases data for variables such as “Location Reliability”, “ID Reliability”, “Platform”, and “Strand or Entrapment Outcome” were derived from interpretation of the comments associated with the report, if available. For description of the variables in the dataset see the Data Dictionary.References:Mosnier, A., Gosselin, J.-F., Lawson, J., Plourde, S., and Lesage, V. 2018. Predicting seasonal occurrence of leatherback turtles (Dermochelys coriacea) in eastern Canadian waters from turtle and sunfish (Mola mola) sighting data and habitat characteristics. Can. J. Zool. 97: 464-478. https://doi.org/10.1139/cjz-2018-0167

Species characterization by environmental DNA (eDNA) is a method that allows the use of DNA released into the environment by organisms from various sources (secretions, faeces, gametes, tissues, etc.). It is a complementary tool to standard sampling methods for the identification of biodiversity. This project provides a list of invertebrates species whose DNA has been detected in water samples collected at 2018 using the marker COI.The surveys were carried out in the summer of 2018 from August 11 to 14, between Forestville and Godbout (Haute-Côte-Nord). Sampling was carried out between 9-52 meters depth in 40 stations with one sample par station. Two liters of water were filtered through a 1.2 µm fiberglass filter. DNA extractions were performed with the DNeasy Blood and Tissue extraction kit (Qiagen). Negative field, extraction and PCR controls were added at the different stages of the protocol. Libraries at the COI locus were prepared by Genome Quebec and sequenced on an Illumina MiSeq PE250 system. The bioinformatics analysis of the sequences obtained was carried out using an in-house analysis pipeline as reported in Bourret et al. 2022. A first step made it possible to obtain a molecular operational taxonomic unit table (MOTU) using the cutadapt software for the removal of the adapters and the DADA2 R package for the filtration, fusion, chimera removal and data compilation. The MOTUs table was subsequently corrected by taking into account the negative controls, where the number of observations in the latter was removed from the linked samples. Singleton MOTUs have also been removed. Finally, the taxonomic assignments were carried out on the MOTUs using the IDTAXA classifier (present in the DECIPHIER R package) using a training set trained on the COI reference bank for Golf St-Laurent (GSL-rl v1.0, https://github.com/GenomicsMLI-DFO/MLI_GSL-rl) and a threshold of 40. Detections with an “Unreliable due to gaps” category were reported at the genus level only.The file provided includes generic activity information, including site, station name, date, marker type, assignment types used for taxa identification, and a list of taxa or species. The list of taxa has been verified by a biodiversity expert from the Maurice-Lamontagne Institute.This project was funded by Fisheries and Oceans Canada's Coastal Environmental Baseline Data Program under the Oceans Protection Plan. This initiative aims to acquire baseline environmental data that contributes to the characterization of significant coastal areas and supports evidence-based assessments and management decisions to preserve marine ecosystems.Data are also available on SLGO platform : https://doi.org/10.26071/ogsl-cd4c205b-f63b

The bedrock geologic units designate units of the same types of rock which composed the solid rock exposed at ground surface (as outcrop) or which underlies unconsolidated surficial sediments. This dataset represents a general description of the stratigraphy and geology, including geologic unit thickness, morphology, age and rank. It features a list of the geologic unit names and types of rock (lithology) in the hydrogeological unit, from a controlled vocabulary. While the preferred format to deliver this data is by using a shapefile and its linked attributes, this dataset can be delivered also by providing link to external data which should have at least the same properties or also by joining a georeferenced image of the map.

Historical finds of Operophtera brumata

This project was completed by the Productive Capacity group (Coastal and Freshwater Ecology Section) in the Newfoundland and Labrador Science Branch of Fisheries and Oceans Canada (DFO). American lobster (Homarus americanus) is a commercially important decapod crustacean species along the east coast of North America, ranging from the Labrador coast south to Cape Hatteras. Juvenile lobster < 40 mm CL (carapace length) recruitment has been studied extensively in the southern portions of their range. However, investigations of settlement habitat association and recruitment of juvenile lobster in the northern extremes along the Newfoundland coast have been largely unsuccessful. We investigated juvenile lobster density, habitat, and depth associations in three areas of Newfoundland, using scuba – Port Saunders area, 8 dives conducted 28 September - 2 October 2017, and Burin Peninsula 10 dives (7 Placentia Bay, 3 Fortune Bay) conducted 30 September - 4 October 2018 over a total seabed area of 9,138 m2, within 200 meters of shore. Port Saunders and Fortune Bay had relatively higher lobster density (0.09 and 0.40 m-2, respectively); >65% were juveniles, in contrast to Placentia Bay where lobster densities of all size groups were low (mean 0.01 m-2) and no juvenile lobsters were observed at all. Where observed all juvenile lobster were significantly associated with shallow (<6 m) habitat and showed no overlap with distribution of adults (>82.5 mm CL) which we observed at depths 6 to 17 m. Our sites were dominated by varying mixes of cobble and pebble (77%); rock/bedrock (12%) and mud/sand/small pebble (11%) substrates interspersed with overlying kelp (32%) and eelgrass (11%) vegetation. We observed no significant associations with substrate or vegetation. This record contains the geographic locations of the 7 Placentia Bay sites surveyed, and information on the timing and type of data collected at each site, which was one component supported by Coastal Environmental Baseline Program of a larger collaborative project.

The Okanagan Lake kokanee shore spawner data set is comprised of multiple combined data sets. The historical data sets for the years 1974, 77, 78, 79 and 80 and more recent data sets collected from 2001 to 2016, and 2018. The historical data was derived from information collected in the field and hand drawn onto air photographs. Ministry staff circled Okanagan Lake in a boat one time each year and recorded fish numbers and spawner locations onto air photographs that were digitized in 2006 to make up the historical data set. This data set may not capture the peak reach count for these years. The data collected from 2001 to 2018 was derived from boat counts undertaken along the shoreline of Okanagan, Wood and Kalamalka Lakes. A GPS was used to record shore spawner locations and numbers. Multiple counts were undertaken over the entire spawning cycle and covered the peak spawning period for each year of data provided. The data collected for Christina Lake began in 2003 and ended in 2006. Christina Lake kokanee spawn at night in late December and early January. Kokanee spawning redd locations are available for the 2003/2004 count. Kokanee enumerations were undertaken at night for the 2004/2005 and 2005/2006 seasons and spawning redds were counted at the end of spawning cycle. For these two years there is both spawning and redd count data available.

A research survey of Iceland scallops (Chlamys islandica) using a dredge has been carried out by DFO (Fisheries and Oceans Canada) every 1 or 2 years since 1990 in the Mingan Archipelago ( fishing areas 16E and 16F). The main objective of this research survey was to assess Icelandic Scallop stocks. Another objective was to documented taxa in the captures associated with scallop habitat according to a fixed sampling plan. Occurrences by species (or taxon) are presented by station. The taxonomic and geographical validity of the data was checked and the World Register of Marine Species served as the taxonomic authority for naming all taxa recorded during the survey. Epibenthic invertebrates (mainly molluscs, echinoderms and crustaceans) as well as demersal fish were identified from the dredge catches.The study area is located around the Mingan Archipelago and the sampling of scallop beds is carried out at depths of 8 to 136 m, generally around 40 to 60 m. Sampling is done along transects at fixed stations in the study area. Sampling is done with a lined Digby scallop dredge (20 mm mesh) over approximately 150 m along the seabed. The four baskets of the dredge are examined for all scallops. Next, a basket (the first on the starboard side) is sorted and examined for associated species. Most specimens are counted by taxa. The presence or relative abundance of undersized and numerous, or colonial, organisms is noted. Special cases are sometimes retained for taxonomic analysis, for example, ascidians (to monitor invasive species) and sponges (to document new species).

A research survey of scallops (mainly sea scallop Placopecten magellanicus, but also Icelandic Scallop Chlamys islandica) using a dredge was carried out by DFO (Fisheries and Oceans Canada) every 1 or 2 years since 1992 in the Magdalen Islands (fishing area 20). The main objective of this research survey was to assess Sea Scallop stocks. Another objective was to document taxa associated with scallop habitat according to a fixed random sampling plan. Occurrences for the year 2021 and 2022 are presented by species (or taxon) by station. Starting in 2021, catches were weighed, and specimens photographed, with information available upon request. The taxonomic and geographical validity of the data was checked and the World Register of Marine Species served as the taxonomic authority for naming all taxa recorded during the survey. Epibenthic invertebrates (mainly molluscs, echinoderms and crustaceans) as well as demersal fish were identified from the dredge catches. The historical dataset is available at the following link : https://open.canada.ca/data/en/dataset/71732ad5-5c70-4dbf-916d-a94e1380c53bThe study area is located south of the Magdalen Islands and the sampling of scallop beds is carried out at depths of generally around 25 to 35 m. A random selection of sampling stations is carried out from a fixed station grid. Sampling is done along transects at these randomly drawn stations in the study area. Sampling is done with a lined Digby scallop dredge (20 mm mesh) over approximately 500 m along the seabed. The four baskets of the dredge are examined for all scallops, and starting in 2022, also for all fishes. One basket (first on the starboard side) is sorted and examined for associated species. Most specimens are counted by taxa. Those that are too small and numerous, or colonial, are noted for presence or relative abundance. Special cases are occasionally conserved for taxonomic analysis, for example, ascidians (to monitor for invasive species) and sponges (to document new species). The availability of photos and some conserved specimens enables future review. Changes are anticipated in the identifications, notably for Bryozoan, Hydrozoa, and Porifera, that are currently the focus of research efforts.

A research survey of scallops (mainly sea scallop Placopecten magellanicus, but also Icelandic Scallop Chlamys islandica) using a dredge was carried out by DFO (Fisheries and Oceans Canada) every 1 or 2 years since 1992 in the Magdalen Islands (fishing area 20). The main objective of this research survey was to assess Sea Scallop stocks. Another objective was to document taxa associated with scallop habitat according to a fixed random sampling plan. Occurrences by species (or taxon) are presented by station. The taxonomic and geographical validity of the data was checked and the World Register of Marine Species served as the taxonomic authority for naming all taxa recorded during the survey. Epibenthic invertebrates (mainly molluscs, echinoderms and crustaceans) as well as demersal fish were identified from the dredge catches. The current data starting in 2021 are available at the following link : https://open.canada.ca/data/en/dataset/6529a4b0-f863-4568-ac71-1fa26cf68679The study area is located south of the Magdalen Islands and the sampling of scallop beds is carried out at depths of 10 to 38 m, generally around 25 to 35 m. A random selection of sampling stations is carried out from a fixed station grid. Sampling is done along transects at these randomly drawn stations in the study area. Sampling is done with a lined Digby scallop dredge (20 mm mesh) over approximately 500 m along the seabed. The four baskets of the dredge are examined for all scallops. Next, a basket (the first on the starboard side) is sorted and examined for associated species. Most specimens are counted by taxon. The presence or relative abundance of undersized and numerous, or colonial, organisms is noted. Special cases are sometimes retained for taxonomic analysis, for example, ascidians (to monitor invasive species) and sponges (to document new species).