Marine protected areas (MPAs) are one among a number of spatial management tools, and are defined as areas that are established for the long-term, and managed through legal or other effective means, to achieve the long-term conservation of nature with associated ecosystem services and cultural values.Currently, Fisheries and Oceans Canada has a number of MPAs designated under the Oceans Act and Areas of Interest for new MPAs at various stages of progress towards designation. These areas are ecologically significant, with species and/or features that require special management consideration.  An Oceans Act MPA can be established for any of the six conservation purposes outlined in the Act:• The conservation and protection of commercial and non-commercial fishery resources, including marine mammals, and their habitats;  • The conservation and protection of endangered or threatened marine species, and their habitats;  • The conservation and protection of unique habitats;  • The conservation and protection of marine areas of high biodiversity or biological productivity; • The conservation and protection of any other marine resource or habitat as is necessary to fulfill the mandate of the Minister; and• The conservation and protection of marine areas for the purposes of maintaining ecological integrity

Records of marine mammal sightings (N = 5,324) collected by ASOs and submitted to Fisheries and Oceans Canada (DFO) between 1979-2024, across three DFO regions: the Arctic, Newfoundland and Labrador, and the Maritimes. Methods for initial data compilation are provided in the associated technical report "Marine mammal records collected by the at-sea observer (ASO) program in Arctic, Newfoundland and Labrador, and Maritimes regions: a summary of challenges and opportunities for future research." Cite this data as: Feyrer, L.J., Colbourne, N., Lawson, J.W., Moors-Murphy, H.B., Ferguson, S. Dataset update to Marine mammal records collected by the At-Sea Observer program in Arctic, Newfoundland and Labrador and Maritimes regions. Published: February 2025. Ocean Ecosystems Science Division, Fisheries and Oceans Canada, Dartmouth, N.S.

As part of the Musquash Marine Protected Area (MPA) Monitoring Plan, this project was implemented to establish a baseline for infaunal biodiversity for this area. Data collection began in 2010 and contributed monitoring information for productivity, biodiversity, and habitat indicators within the Musquash Harbour. A 1500 cubic centimetre ponar benthic grab was deployed at 30 random stations distributed over three strata (channel, intertidal and subtidal). Samples were to be collected up to three times per year to account for seasonality and annual variation. Once collected the benthic samples were analyzed for changes in grain size, carbon content (Loss on ignition), species abundance/diversity and biomass.Cite this data as: Cooper, J.A., and Blanchard, M. Musquash Benthic Infauna. Published in September 2023. Coastal Ecosystem Science Division, Fisheries and Oceans Canada, St. Andrews, NB.For additional information please see:Cooper, A., Abbott, M., Allard, K., Chang,, B., Courtenay, S., Doherty, P., Greenlaw, M., Ipsen, E., Koropatnick, T., Law, B., Losier, R., Martin, J., Methven, D., and Page, F. 2014. Musquash Estuary Marine Protected Area (MPA): Data Assessment. DFO Can. Sci. Advis. Sec. Res. Doc. 2014/001. v + 57 p.Cooper, J.A., Jones, O. and Blanchard, M. 2023. Review of Baseline Monitoring within the Musquash Estuary Marine Protected Area. DFO Can. Sci. Advis. Sec. Res. Doc. 2023/028. viii + 56 p.Oceans and Coastal Management Division (OCMD). 2015. Musquash Estuary Marine Protected Area Ecosystem Monitoring Plan (2014-2019). Can. Manuscr. Rep. Fish Aquat. Sci. 3077: v+17 pp.DFO. 2022. 2021 Review of Musquash Marine Protected Area Monitoring. DFO Can. Sci. Advis. Sec. Sci. Advis. Rep. 2022/016.

The Steller sea lion (Eumetopias jubatus) is the largest species of sea lion with males weighing as much as 1,100 kg and females as much as 350 kg. In Canada, the Steller can be spotted along the rocky coast of British Columbia (BC). These highly mobile marine mammals typically travel alone or in small groups, but they congregate in large numbers at traditional rookeries and haul-outs during the mating and pupping season. Females generally live longer (up to 30 years) than males (usually up to 20 years). The population was severely depleted in Canada but following its protection in 1970, the size of the adult population has more than doubled.Trends in the abundance of Steller sea lions in BC have been assessed based on a series of standardized, province-wide aerial surveys conducted during the breeding season (27-June to 06-July) between 1971 and 2021. Additional ad-hoc surveys during the fall, winter, and spring periods were completed to assess sea lion distribution outside of the breeding season. Surveys targeted historically occupied rookeries and haul-out sites with nearby areas also monitored for potential shifts in distribution.Both datasets contain counts that have been collected from sightings of individuals from 1971 through 2021. The updated standard breeding season survey counts data file consolidates and extends two previous datasets – one covering 1971 through 2013 and the other covering the summer portion of the 2016/2017 surveys. The non-breeding season count data was previously limited to the fall-winter portion of the 2016/2017 surveys and the updated data covers the entire study period to date.

Species characterization by environmental DNA (eDNA) is a method that allows the use of DNA released into the environment by organisms from various sources (secretions, faeces, gametes, tissues, etc.). It is a complementary tool to standard sampling methods for the identification of biodiversity. This project provides a list of fish and marine mammal species whose DNA has been detected in water samples collected between 2019 and 2021 using the mitochondrial marker MiFish (12S).The surveys were carried out in the summer of 2019 (July 14-18) and (July 30 - August 5), in the fall of 2020 (October 27-28) and in the summer-fall of 2021 (May 31 - June 3 ) and (August 24-25) between Forestville and Godbout (Haute-Côte-Nord). Sampling was carried out between 1-50 meters depth in 91 stations, with 1 to 3 replicates per station. Two liters of water were filtered through a 1.2 µm fiberglass filter. DNA extractions were performed with the DNeasy Blood and Tissues or PowerWater extraction kit (Qiagen). Negative field, extraction and PCR controls were added at the different stages of the protocol. The libraries were prepared either by Génome Québec (2019, 2020) or by the Genomics Laboratory of the Maurice-Lamontagne Institute (2021), then sequenced on a NovaSeq 4000 PE250 system by Génome Québec. The bioinformatics analysis of the sequences obtained was carried out using an analysis pipeline developed in the genomics laboratory. A first step made it possible to obtain a table of molecular operational taxonomic units (MOTU) using the cutadapt software for the removal of the adapters and the R package DADA2 for the filtration, the fusion, removal of chimeras and compilation of data. The MOTUs table was then corrected using the R package metabaR to eliminate the tag-jumping and take contaminants into consideration. Samples showing a strong presence of contaminating MOTUs were removed from the dataset. The MOTUs were also filtered to remove all remaining adapter sequences and also retain only those of the expected size (around 170 bp). Finally, taxonomic assignments were made on the MOTUs using the BLAST+ program and the NCBI-nt database. Taxonomic levels (species, genus or family) were assigned using a best match method (Top hit), with a threshold of 95%. Only assignments at the level of fish and marine mammals were considered, and the taxa detected were compared to a list of regional species, and corrected if necessary. The species detections of the different replicas have been combined.The file provided includes generic activity information, including site, station name, date, marker type, assignment types used for taxa identification, and a list of taxa or species. The list of taxa has been verified by a biodiversity expert from the Maurice-Lamontagne Institute.This project was funded by Fisheries and Oceans Canada's Coastal Environmental Baseline Data Program under the Oceans Protection Plan. This initiative aims to acquire baseline environmental data that contributes to the characterization of significant coastal areas and supports evidence-based assessments and management decisions to preserve marine ecosystems.Data were also published on SLGO platform : https://doi.org/10.26071/ogsl-2239bca5-c24a

11 tagged Blue whales (Balaenoptera musculus) were tracked during the daytime movements as well as the feeding behaviour in the St. Lawrence River estuary. Kernel density was applied to derminate the high density feeding areas of all individuals combined (30, 40, 50, 60, 75, 95 %).Doniol-Valcroze T, Lesage V, Giard J, Michaud R, 2012. Challenges in marine mammal habitat modelling: evidence of multiple foraging habitats from the identification of feeding events in blue whales. Endang Species Res, Vol. 17 : 255–268, doi : 10.3354/esr00427(English version only)

This cartographic dataset represents a geomorphological update of the boundaries of the five inland water bodies that form the Magdalen Islands Marine Refuge. It was produced by Fisheries and Oceans Canada (DFO) as part of its marine refuge characterization work.The data used comes from the August 15, 2022 version of the Quebec maritime Geospatial Database of Coastal Ecosystems (GDB), developed from various sources including satellite and airborne images from 2019 (Jobin et al. 2021; Provencher-Nolet et al. 2024). The boundaries of the inland water bodies were defined according to the upper high tide line, which represents the maximum extent of the water during the highest tides.The final product is a polygonal shapefile representing the five inland water bodies of the marine refuge as well as the terrestrial areas of the archipelago. The data are projected in NAD83 / MTM zone 4.For more information on the method used to generate this layer from the GDB, see Grégoire et al. (2026). The method used to create the source geospatial data is described in Jobin et al. (2021) and Provencher-Nolet et al. (2024).

PURPOSE:From August 1st to September 11th, 2014, Fisheries and Oceans Canada conducted a baseline survey of marine fishes and their habitats in the southern Canadian Beaufort Sea and Amundsen Gulf as part of the Beaufort Regional Environmental Assessment (BREA) called the Beaufort Sea Marine Fishes Project (BSMFP). Sampling was conducted from the F/V Frosti at 54 stations along 14 transects. Standardized sampling was conducted at pre-determined depth stations (20-1500 m) using benthic trawling nets. The BSMFP is the first research project to use large research trawls to assess the biodiversity and abundance of offshore marine fishes in this area. In total, 42 species of fish were caught. This report contains information on fishing net deployments, catch per unit effort (CPUE), and basic biological data for all fishes caught.DESCRIPTION:Basic biological data for all fish caught during the 2014 BSMFP expedition. Includes identification, weight, length (total, fork, and, standard), liver weight, gonad weight, sex and maturity level. PARAMETERS COLLECTED:familyspeciesweighttotal lengthfork lengthstandard lengthliver weightgonad weightsexmaturitySAMPLING METHODS:Various trawl types.

PURPOSE:In this study, we examined the structure and function of the Southampton Island marine food web across 149 species of benthic and pelagic invertebrates, fishes, marine mammals and seabirds collected from 2016 to 2019, to provide a baseline for future studies that aim to quantify temporal changes in food web structuring. More specifically,we used a multi-biomarker approach combining stable isotopes and HBIs to: (i) determine the vertical trophic structure of the marine food web, (ii) investigate the contribution of benthic and pelagic-derived prey to the higher trophic level species of the Arctic food web, and (iii) determine the role of ice algae and phytoplankton carbon source use across different trophic levels and compartments (pelagic and benthic). By shedding new light on the functioning of the Southampton Island food web and specifically how the contribution of ice algae and benthic habitat shapes its structure, these results will be relevant to adaptive management and conservation initiatives implemented in response to anthropogenic stressors and climate change. DESCRIPTION:Climate-driven alterations of the marine environment are most rapid in Arctic and subarctic regions, including Hudson Bay in northern Canada, where declining sea ice, warming surface waters and ocean acidification are occurring at alarming rates. These changes are altering primary production patterns that will ultimately cascade up through the food web. Here, we investigated (i) the vertical trophic structure of the Southampton Island marine ecosystem in northern Hudson Bay, (ii) the contribution of benthic and pelagic-derived prey to the higher trophic level species, and (iii) the relative contribution of ice algae and phytoplankton derived carbon in sustaining this ecosystem. For this purpose, we measured bulk stable carbon, nitrogen and sulfur isotope ratios as well as highly branched isoprenoids in samples belonging to 149 taxa, including invertebrates, fishes, seabirds and marine mammals. We found that the benthic invertebrates occupied 4 trophic levels and that the overall trophic system went up to an average trophic position of 4.8. The average δ34S signature of pelagic organisms indicated that they exploit both benthic and pelagic food sources, suggesting there are many interconnections between these compartments in this coastal area. The relatively high sympagic carbon dependence of Arctic marine mammals (53.3 ± 22.2 %) through their consumption of benthic invertebrate prey, confirms the important role of the benthic subweb for sustaining higher trophic level consumers in the coastal pelagic environment. Therefore, a potential decrease in the productivity of ice algae could lead to a profound alteration of the benthic food web and a cascading effect on this Arctic ecosystem.Collaborators:Centre for Earth Observation Science, University of Manitoba, Winnipeg, Manitoba, Canada - R´emi Amiraux, C.J. Mundy, Jens K. Ehn, Z.A. Kuzyk.Quebec-Ocean, Sentinel North and Takuvik, Biology Department, Laval University, Quebec, Quebec, Canada - Marie Pierrejean.Scottish Association for Marine Science, Oban, UK - Thomas A. Brown.Department of Natural Resource Sciences, McGill University, Ste. Anne de Bellevue, Quebec, Canada - Kyle H. Elliott.Department of Biological Sciences, University of Manitoba, Winnipeg, Manitoba, Canada - Steven H. Ferguson, Cory J.D. Matthews, Cortney A. Watt, David J. Yurkowski.School of the Environment, University of Windsor, Windsor, Ontario, Canada - Aaron T. Fisk.Science and Technology Branch, Environment and Climate Change Canada, Ottawa, Ontario, Canada - Grant Gilchrist.College of Fisheries and Ocean Sciences, University of Alaska Fairbanks, Fairbanks, AK, USA - Katrin Iken.Department of Earth Sciences, University of New Brunswick, Fredericton, NB, Canada - Audrey Limoges.Department of Integrative Biology, University of Windsor, Windsor, Ontario, Canada - Oliver P. Love, Wesley R. Ogloff.Department of Arctic Biology, The University Centre in Svalbard, Longyearbyen, Norway - Janne E. Søreide.

In 2016-17, DFO Maritimes Region undertook a Marine Protected Area (MPA) network analysis for the Scotian Shelf-Bay of Fundy Bioregion. The analysis considered available bioregional-scale ecological and human use data in an effort to identify a draft MPA network design that would protect biodiversity while minimizing any potential impacts on commercial fishing and other industries. The data layers used for the offshore component of the MPA network analysis are provided here. These layers are not presented in their original forms and were modified (e.g. clipped, reclassified, etc.) specifically for use in the MPA network analysis. They should not be used for any other purpose. Please see Serdynska et al. 2021 for details on how each layer was created.Serdynska, A.R., Pardy, G.S., and King, M.C. 2021. Offshore Ecological and Human Use Information considered in Marine Protected Area Network Design in the Scotian Shelf Bioregion. Can. Tech. Rep. Fish. Aquat. Sci. 3382: xi + 100 p. https://publications.gc.ca/collections/collection_2021/mpo-dfo/Fs97-6-3382-eng.pdfCite this data as: Serdynska, A.R., Pardy, G.S., and King, M.C. Data of: Offshore Ecological and Human Use Information considered in Marine Protected Area Network Design in the Scotian Shelf Bioregion. Published: January 2022. Fisheries and Oceans Canada, Dartmouth, N.S. https://open.canada.ca/data/en/dataset/2d9cce9a-d634-4b49-879f-87c40c52acf2