Polar cod (Boreogadus saida), Atlantic cod (Gadus morhua), and Greenland cod (Gadus macrocephalus) are prominent gadid species within the northwest Atlantic Ocean in terms of their ecological and socio-economic importance but it is unclear how climate-induced changes in ocean temperature may alter their distributions by the end of the century (2100). We used physiologically based species distribution models to predict how ocean warming will influence the availability of suitable habitat for early life-stages in these marine gadids. We applied CMIP5 ocean temperature projections to egg survival and juvenile growth models for Polar cod, Atlantic cod, and Greenland cod to create predicted suitability raster surfaces for these metrics across four climatology periods (1981–2005, 2026–2050, 2051–2075, 2076–2100). The analysis focused on the projected changes in temperature in ocean shelf areas where ocean depth is ≤400 m. We created an integrated habitat suitability index by combining the suitability surfaces for egg survival and growth potential to predict areas and periods where thermal conditions were suitable for both life stages. The resulting surfaces indicate that suitable thermal habitat for the juvenile life stages of all three species will shift poleward, but the magnitude of the shift and the overall area of thermally suitable habitat remaining will differ across species and life stages through time. Modelled layers are provided in NetCDF format by metric (egg survival, growth potential, habitat suitability). Data layers for Polar cod, Atlantic cod, and Greenland cod are included within each NetCDF file as variables across time. Note that in this study we refer to Gadus macrocephalus/ogac as Greenland cod since Gadus ogac is thought to be a junior synonym of Gadus macrocephalus (Carr et al., 1999). For more details on the methods and results for this analysis see Cote et al. (2021).References:Carr, S. M., Kivlichan, D. S., Pepin, P., & Crutcher, D. C. (1999). Molecular systematics of gadid fishes: implications for the biogeographic origins of Pacific species. Canadian Journal of Zoology, 77(1), 19–26. https://doi.org/10.1139/cjz-77-1-19Cote, D., Konecny, C. A., Seiden, J., Hauser, T., Kristiansen, T., & Laurel, B. J. (2021). Forecasted Shifts in Thermal Habitat for Cod Species in the Northwest Atlantic and Eastern Canadian Arctic. Frontiers in Marine Science, 8(November), 1–15. https://doi.org/10.3389/fmars.2021.764072

The Department of Fisheries established a survey of demersal juvenile Atlantic cod (*Gadus morhua*) in the nearshore (<10 m deep) in 1959. This survey aimed to characterize the distribution and abundance of juvenile Atlantic cod and was based upon Norway's Flodevigen sampling program which has been conducted continuously since 1919. A 25 m seine was used to sample juvenile Atlantic cod nursery locations on the Avalon Peninsula and Northeast coast of the island of Newfoundland in September and October. The survey continued until 1964 and became known as the Fleming survey, after original initiator Alistair Fleming. The survey was reinstated by Memorial University of Newfoundland from 1992 to 1997. Multiple tows were conducted at a subset of the original 55 Fleming sites located in St. Mary's Bay, Trepassey Bay, the Southern Shore, Conception Bay, Trinity Bay, Bonavista Bay, Gander Bay, New World Island, Fortune Harbour, Badger Bay, Halls Bay and Green Bay.This data set includes several different subsets, some of which span both Fleming Survey periods (1959-1964 and 1992-1997):I. JuvCodCatch60s90s:Catches of juvenile Atlantic cod (1959-1964, 1992-1997) from the first two consecutive tows at each site. This is a summary based on JuvCodLengths90s and FlemingSurveyData60s;II. JuvCodLength90s:Lengths of all individual juvenile Atlantic cod caught for each site (1992-1997);III. SiteEnvData60s90s:Station data for Fleming data 1992-1997;IV. FlemingSurveyData60s:Fleming survey data from 1959-1964 (note there are three record types pertaining to: station data "type 1"; general species catch data including juvenile Atlantic cod grouped by age class ("1+", "Zeroes", and "Total") "type 2; and juvenile Atlantic cod (species 223) listed in length bins "type 3"; andV. FlemingBycatch60s92to96:Bycatch data from 1959-1964 & 1992-1996 from first two tows at each site. This is a summary based partly on the FlemingSurveyData60s set.

SummaryThe Quebec region of the Department of Fisheries and Oceans (DFO) is responsible for the assessment of several fish and invertebrate stocks exploited in the Estuary and the northern Gulf of St. Lawrence. The commercial catches sampling program is one of the sources of information used to complete these assessments. The data collected by this program, at wharf or at sea, offers among other things the advantage of a relatively large spatio-temporal coverage and provides some of the necessary knowledge to assess the demography and the structure of the exploited populations. This program is implemented by specialized DFO staff whose main mandate is to collect biological data on groundfish, pelagic fish and marine invertebrate species that are commercially exploited in the various marine communities.DataThis dataset on the Atlantic cod (Gadus morhua) includes the metadata, sample weight, fish length, the sex and the number of specimens measured. This dataset covers the period of 1983 to present. In order to protect the confidentiality of the sources, some informations (such as those concerning the vessel) have been excluded and others (such as the date of capture) have been simplified. Entries where there was only one vessel in a fishing area for a given year were also excluded. Further information including the fishing areas coordinates can be found by clicking on the «Atlantic and Arctic commercial fisheries» and «Fishing areas» links below.

PURPOSE:These data have been updated following a Canadian Science Advice Secretariat (CSAS) Regional Science Advisory Process. Associated publications are available in the citation section below or will be posted on the Fisheries and Oceans Canada (DFO) Science Advisory Schedule as they become available.Determine the stock status of southern Gulf of St. Lawrence Atlantic Cod. DESCRIPTION:The yearly spawning stock biomass estimates of southern Gulf of St. Lawrence Atlantic Cod were obtained using a Statistical Catch-at-Age model as part of the stock assessment to year 2023.The yearly estimates presented come from Markov Chain Monte Carlo (MCMC) simulations. The yearly median estimates are provided, along with uncertainty estimates (2.5th, 25th, 75th and 97.5th percentiles). The values are in thousands of tons of spawning stock biomass. USE LIMITATION:To ensure scientific integrity and appropriate use of the data, we would encourage you to contact the data custodian.

In Canada, DFO assessments have reported a high probability of significant climate change impacts in all marine and freshwater basins, with effects increasing over time (DFO 2012a, 2012b), while climate projections indicate that ecosystems and fisheries will be disrupted into the foreseeable future (Lotze et al. 2019b; Bryndum-Buchholz et al. 2020; Tittensor et al. 2021; Boyce et al. 2022c). Despite its imminence, climate change is infrequently factored into Canada’s primary marine conservation strategies, such as spatial planning (O’Regan et al. 2021) or fisheries management (Boyce et al. 2021a; Pepin et al. 2022). The Climate Risk Index for Biodiversity was developed to assess climate risk for marine species in a quantitative, spatially explicit, and scalable way to better support climate-informed decision-making. It has been used to evaluate climate risks for marine life globally (Boyce et al. 2022a), regionally (Lewis et al. 2023), and for fisheries (Boyce et al. 2022c). These data present results from application of the CRIB framework to estimate average climate risks associated with sea surface warming across 2,959 species throughout the Canadian marine territory under contrasting future emission scenarios. In the Technical Report accompanying this data publication, we use Atlantic cod (Gadus morhua) as an example to describe the approach’s data, methods, and outputs, and to transparently and tangibly show how it quantifies risk and can inform and support climate-informed decision-making in Canada. Cite this data as: Boyce, D., Greenan, B., Shackell, N. Data of:A climate risk index for marine life across the Canadian exclusive economic zone.Published: January 2024. Ocean Ecosystems Science Division, Fisheries and Oceans Canada, Dartmouth, N.S.https://open.canada.ca/data/en/dataset/2a0b3298-2bcc-49a0-a745-af56ed0462f1

The Quebec region of the Department of Fisheries and Oceans (DFO) is responsible for the assessment of several fish and invertebrate stocks exploited in the Estuary and the northern Gulf of St. Lawrence. The commercial catches sampling program is one of the sources of information used to complete these assessments. The data collected by this program, at wharf or at sea, offers among other things the advantage of a relatively large spatio-temporal coverage and provides some of the necessary knowledge to assess the demography and the structure of the exploited populations. This program is implemented by specialized DFO staff whose main mandate is to collect biological data on groundfish, pelagic fish and marine invertebrate species that are commercially exploited in the various marine communities.The following species have been sampled by this program from 1976 to present:1. American lobster (Homarus americanus)2. American plaice (Hippoglossoides platessoides)3. Atlantic cod (Gadus morhua)4. Atlantic halibut (Hippoglossus hippoglossus)5. Atlantic herring (Clupea harengus)6. Atlantic lyre crab (Hyas araneus)7. Atlantic mackerel (Scomber scombrus)8. Atlantic surfclam (Spisula solidissima)9. Arctic Lyre Crab (Hyas coarctatus)10. Capelin (Mallotus villosus)11. Common softshell clam (Mya arenaria)12. Giant scallop (Placopecten magellanicus)13. Greenland halibut (Reinhardtius hippoglossoides)14. Green urchin (Strongylocentrotus droebachiensis)15. Iceland scallop (Chlamys islandica)16. Redfish (Sebastes sp.)17. Rock crab (Cancer irroratus)18. Sea cucumber (Cucumaria frondosa)19. Snow crab (Chionoecetes opilio)20. Stimpson surfclam (Mactromeris polynyma)21. Waved whelk (Buccinum undatum)22. White hake (Urophycis tenuis)23. Winter flounder (Pseudopleuronectes americanus)24. Yellowtail flounder (Limanda ferruginea)For more information concerning these species, see the «Related Products» section below.

In place since fall 1994, the sentinel fisheries program is the result of a collaboration between Fisheries and Oceans Canada (DFO) and Quebec and Newfoundland commercial fishermen's associations. Under this program, contracts are awarded by tender to fishermen’s associations to carry out fishing activities according to scientific protocols developed by DFO. The main objective of this survey is to collect data that will be used to calculate abundance indices for the northern Gulf of St. Lawrence Atlantic cod stock.Description of fixed gears surveyThe fixed gear sentinel fisheries of the northern Gulf of St. Lawrence are conducted in the sub-division 3Pn and the divisions 4R, 4S of the Northwest Atlantic Fisheries Organization (NAFO) using fixed gillnets or longlines (other fishing gears were also used at the start of the program). Fishing activities with nets must have a mesh size of 5 ½ inches (140mm) and are limited to a maximum of 6 to 20 nets depending on the region and capture and the target immersion time is between 19 to 24 hours. Longline fishing activities, for its part, must be carried out with traditional J #16 or C #12 hooks. The maximum number of hooks varies from 500 to 1000, depending on the catch, and the target immersion time is 4 to 6 hours. Data are collected by observers at sea or by technicians.DataFor each fishing activity, the total catch is sorted and weighed by species. For each species other than Atlantic cod, the number of individuals caught is noted. Atlantic cod are then measured at the fork (cm). Other biological data such as weight (total, gonad, liver and stomach), age, sex and maturity can then be collected on a subsample of cod.The biological data are divided into 4 files: a “Metadata” file containing set information, a “Catches” file containing catches per set for fish taxa, a “Carbio” file containing biological and morphometric measurements per individual, a “Freql” file containing the length frequency of fish.The data collected as part of this program is available below. It is important to note, however, that 1) only traits deemed successful have been retained; 2) historical data may contain inaccuracies; 3) the most recent survey is not available for validation purposes.

In place since fall 1994, the sentinel fisheries program is the result of a collaboration between Fisheries and Oceans Canada (DFO) and Quebec and Newfoundland commercial fishermen's associations. Under this program, contracts are awarded by tender to fishermen’s associations to carry out fishing activities according to scientific protocols developed by DFO. The main objective of this survey is to collect data that will be used to calculate abundance indices for various fish stocks, including cod, Greenland halibut, Atlantic halibut and rockfish.Description of mobile surveyThe mobile gear sentinel fisheries of the northern Gulf of St. Lawrence are conducted in the sub-division 3Pn and the divisions 4R, 4S and the northern part of the division 4T of the Northwest Atlantic Fisheries Organization (NAFO). This program follows a stratified random survey plan according to depth strata, NAFO divisions and the type of substrate at the bottom. A standard tow is 30 minutes long and made at a speed of 2.5 knots. The fishing gear is a 300 Star Balloon trawl mounted on a Rock Hopper footgear. The trawl mesh size is 145 mm with a liner of 40 mm in the codend. Unless conditions at sea compromise safety during fishing activity, a retaining cable must be used to standardize the horizontal opening between vessels and the various depths fished. Data are collected by observers at sea or by technicians.The data contained in this program are divided into 4 different projects.-The summer series, carried out during the month of July-The fall series, which covers the period from 1995 to 2002-The winter series, to study the mixing between the different stocks-The CRP (Cod reproductive potential) series, which targets the reproductive potential.DataFor each trait, the total catch is sorted and weighed for each species. The number of individuals caught for each unmeasured fish species is noted. Biological data such as length, weight (sampled, per individual, gonad, liver and stomach), age, sex and maturity migth then be collected on a subsample of many species such as Atlantic halibut, Greenland halibut, lumpfish and Atlantic cod, using a variety of protocols. The biological data are divided into 4 files: a “Metadata” file containing set information, a “Catches” file containing catches per set for fish taxa, a “Carbio” file containing biological and morphometric measurements per individual, a “Freql” file containing the length frequency of fish.The data collected as part of this program is available below. It is important to note, however, that 1) only traits deemed successful have been retained; 2) historical data may contain inaccuracies; 3) the most recent survey is not available for validation purposes.

Fisheries and Oceans Canada (DFO) conducts an annual summer multidisciplinary scientific survey with a bottom trawl in the Estuary and the northern Gulf of St. Lawrence since 1984. Over the years, this survey has been conducted on four vessels: the MV Lady Hammond (1984-1990), the CCGS Alfred Needler (1990-2005), the CCGS Teleost (2004-2021) and the CCGS Cabot (2022-current). It is important to note that the objectives, the methods used and the identification of the species during these surveys have improved over time in response to DFO requests and mandates. The data are therefore not directly comparable between these surveys. The specificities of the missions onboard the MV Lady Hammond are described below.Objectives:1. Assess groundfish populations abundance and condition2. Assess environmental conditions3. Conduct a biodiversity inventory of benthic and demersal megafauna4. Monitor the pelagic ecosystem5. Collect samples for various research projectsSurvey descriptionThe survey covers the northern Gulf of St. Lawrence, that is the divisions 4R, 4S and the northern part of division 4T of the Northwest Atlantic Fisheries Organization (NAFO). A stratified random sampling strategy is used for this survey and the fishing gear used on the MV Lady Hammond is a bottom trawl Western IIA. Standard trawling tows last 30 minutes, starting from the time the trawl touches the sea floor. Towing speed is 3.5 knots.DataFor each fishing tow, the catch is sorted and weighed by taxa; individuals are counted and biological data are collected on a sub-sample. For fish, crab and squid, size and weight are measured by individual and, for some species, sex, gonad maturity, and the weight of certain organs (stomach, liver, gonads) are also evaluated. The soft rays of the anal fin are counted for redfish and otoliths are collected for redfish and Atlantic cod. Invertebrates are weighted and counted (no individual measurements).The biological data are divided into 4 files: a “Metadata” file containing set information, a “Catches” file containing catches per set for fish taxa, a “Carbio” file containing biological and morphometric measurements per individual and a “Freql” file containing the length frequency of fish. It's important to note that this is raw data. Only sets considered successful are retained. In each set, all species are kept, with a few exceptions. For more information please contact the data management team (gddaiss-dmsaisb@dfo-mpo.gc.ca).

These datasets show the general spatial distribution of commercial fishing harvest and landed values by fishery on a 1km x 1km planning grid. They aggregate key statistics around fleet specific fishing activity and catch in British Columbia (BC) within the exclusive economic zone (EEZ). These gridded data describe the annual average landed weight (Rounded KGs), and landed catch values (CAD $2016) of the subject fishery over the period. The data represented were created from logbook records and matched to prices from fish slips submitted to DFO by participants of BC’s commercial fishing fleets. The dataset is comprised of an aggregate of all species over 10, 9, or 5 years of fishing seasons, depending on the fishery. To preserve potentially proprietary information, a privacy filtering Rule of Five has been applied to each planning unit (each 1km x 1km planning unit). If any planning units do not meet this minimum of 5 unique vessels/unique identifiers during the time span then they are flagged as being filtered and an average of all filtered planning units is applied.The accompanying GeoDB contains two data layers, “all_fisheries_filtered_gridded “, which includes all of the commercial fisheries data in 1km x 1km grids, and “DFO_marine_bioregions_NSB_subregions”, which includes polygon feature boundaries for the federal marine bioregions and Northern Shelf bioregion sub-regions.This dataset contains data for the following fisheries:- Bottom trawl (2012-2016)- Midwater trawl (2012-2016)- Shrimp by trawl (2007-2016)- Prawn trap (2007-2016)- Rockfish (2012-2016)- Sablefish (2007-2016)- Halibut (2007-2016)- Combo trips - halibut/sablefish (2007-2016)- Lingcod (2007-2016)- Green sea urchin (2006-2015)- Red sea urchin (2007-2015)- Sea cucumber (2008-2016)- Geoduck (2007-2015)