Layers that present various important parameters such as inventories, presence, sightings, distribution, relative occurrence or catch rates, critical habitat, breeding and feeding areas, potential spawning and haul-out sites for the different species with status under the Species at Risk Act (SARA).The act classifies those species as being either extirpated, endangered, threatened, or of special concern. Under SARA, Fisheries and Oceans Canada must produce recovery strategies and action plans for aquatic species listed as endangered or threatened. The act is part of Canada’s strategy to protect hundreds of wild plants and animal species from becoming extinct, and to help in their recovery.The different species represented by the layers are the following:1. American shad (Alosa sapidissima)2. Atlantic sturgeon (Acipenser oxyrinchus)3. Atlantic wolffish (Anarhichas lupus)4. Beluga whale (Delphinapterus leucas)5. Blue whale (Balaenoptera musculus)6. Copper redhorse (Moxostoma hubbsi)7. Eelgrass (Zostera marina)8. Grey seal (Halichoerus grypus)9. Harbor seal (Phoca vitulina)10. Humpback whale (Megaptera novaeangliae)11. Lake sturgeon (Acipenser fulvescens)12. Lumpfish (Cyclopterus lumpus)13. Northern wolffish (Anarhichas denticulatus)14. Rainbow smelt (Osmerus mordax)15. Sea pens (Pennatulacea)16. Seaweed17. Smooth skate (Malacoraja senta)18. Sponges19. Spotted wolffish (Anarhichas minor)20. Striped bass (Morone saxatilis)21. Thorny skate (Amblyraja radiata)22. Winter skate (Leucoraja ocellata)

PURPOSE:Scope the distribution of Smallmouth Bass in the Miramichi River Watershed using eDNADESCRIPTION:This dataset contains the results of work undertaken from 2019 to 2024 to scope the extent of the spread of Smallmouth Bass in parts of the Miramichi River Watershed using an eDNA-based species-specific qPCR approach.USE LIMITATION:To ensure scientific integrity and appropriate use of the data, we would encourage you to contact the data custodian.

An exploratory project on the taxonomic and genetic diversity of decapods in three ocean subregions (Northeast Pacific, Canadian Arctic, and Northwest Atlantic), which were sampled in 2022, was undertaken by the Arctic Working Group under the Canada-U.S. Fisheries and Climate Collaboration between Fisheries and Oceans Canada (DFO) and the National Marine Fisheries Service (NMFS) of the National Oceanic and Atmospheric Administration (NOAA). This collaboration framework aims to pool Canadian and U.S. data to explore the impacts of broad-scale climate change on marine biodiversity. In early summer 2022, a sampling protocol with the selection of targeted decapods was provided to DFO and NOAA collaborators. Targeted genera were collected from a total of 10 research programs across three ocean subregions and four marine regions. The Northeast Pacific samples were collected in the Bering Sea during the Northern Bering Sea Ecosystem and Surface Trawl Survey, and the Eastern and Northern Bering Sea Continental Shelf Bottom Trawl Survey of Groundfish and Invertebrate Fauna onboard the F/V Northwest Explorer, F/V Alaska Knight and F/V Vesteraalen. In the Western Canadian Arctic (mainly from Beaufort Sea and Amundsen Gulf), specimens were collected during DFO’s Canadian Beaufort Sea – Marine Ecosystem Assessment (CBS-MEA) survey onboard the F/V Frosti. In Eastern Canadian Arctic (mainly from Baffin Bay and Davis Strait), specimens were collected during DFO’s Knowledge and Ecosystem-Based Approach in Baffin Bay (KEBABB) survey onboard the CCGS Amundsen and DFO’s North Atlantic Fisheries Organization (NAFO) Subarea 0B survey onboard the R/V Tarajoq. In the Estuary and Gulf of St. Lawrence (EGSL), specimens were collected from coastal surveys (scallops, sea cucumber, snow crab, and whelk surveys) onboard the CCGS Leim and offshore during the Ecosystemic Survey onboard the CCGS Teleost. Decapods were collected from various sampling gears (benthic beam trawl, modified Atlantic Western IIA otter trawl, Bacalao trawl, shrimp trawl, Digby scallop dredge, or modified sea cucumber dredge) and identified to the lowest possible taxonomic level and photographed, when possible. All specimens were frozen at sea (n = 995). In the lab, the identifications were validated or refined with the photos and the frozen specimens. DNA was extracted for 87 specimens and a section of COI gene was amplified in order to be sequenced using Sanger method. Sequences were compared with existing data using The Basic Local Alignment Search Tool (BLAST) in the National Center for Bio-technology Information Nucleotide database (NCBI-nt, including the GenBank database) to compare scientific names, where available.The present dataset includes 391 decapod species occurrences. DNA was extracted for a subset of 87 specimens (COI gene); sequences are publicly available on BOLD data portal under project code DDAO (see supporting document "citations_references.csv" for more information).The data are presented in Darwin Core format and are separated in three files:The "Activité_décapodes_DDAO_decapods_event_en" file contains information about missions, stations and deployments, which are presented under a hierarchical activity structure.The "Occurrence_décapodes_DDAO_decapods_en" file contains the taxonomic occurrences.The "ADN_décapodes_DDAO_decapods_DNA_en" file contains the DNA derived data.For further details, please refer to the technical report available in the supporting document named "citations_references.csv". USE LIMITATION:To ensure scientific integrity and appropriate use of the data, we would encourage you to contact the data custodian.

Nekton assemblages in Zostera marina beds and adjacent bare soft-sediments were sampled on the south and eastern shore of Nova Scotia. Sampling gear used were visual snorkel transects and a benthic beam trawl. Fish were identified and size either measured (trawl) or estimated in situ (snorkel transects). Surveys were conducted in mid-July to August in summer of 2013 and 2014 across multiple sampling sites. Multiple replicate transects were conducted at each site. Raw abundances from observations were transformed into young of year (YOY) equivalent abundance, and then into density of each species calibrated to account for the sampling equipment and day/night differences.Cite this data as: Wong, M. C. Data of: Fish and large decapods in eelgrass (Zostera marina) beds on the Atlantic coast of Nova Scotia, Canada. Published: April 2020. Coastal Ecosystems Science Division, Fisheries and Oceans Canada, Dartmouth, N.S. https://open.canada.ca/data/en/dataset/dbc56f11-4a97-45e7-99f4-71966b51630c

The porbeagle shark (Lamna nasus), is a species found in Atlantic Canadian waters which is encountered in commercial and recreational fisheries. Pop-up Satellite Archival Tags (PSAT) from Wildlife Computers were applied to porbeagle sharks from 2005 to 2021 to collect data on depth (pressure), temperature and ambient light level (for position estimation). Deployments were conducted in Canada and the Faroe Islands on commercial, recreational and scientific charters, typically in summer and fall but some over winter when the porbeagle commercial fishery was active in Canada. A variety of tag models were deployed: PAT 4 (n=1), Mk10 (N=41), and MiniPAT (N=15) and 51 of 57 tags reported. One individual shark was recaptured and the physical tag was returned. The porbeagle sharks tagged ranged in size from 76 cm to 249 cm Fork Length (curved); 42 were female, 15 were male. Time at liberty ranged from 4 – 356 days and 14 tags remained on for the programmed duration. Raw data transmitted from the PSAT’s after release was processed through Wildlife Computers software (GPE3) to get summary files, assuming a maximum swimming speed of 2m/s, NOAA OI SST V2 High Resolution data set for SST reference and ETOPO1-Bedrock dataset for bathymetry reference. The maximum likelihood position estimates are available in .csv and .kmz format and depth and temperature profiles are also in .csv format. Other tag outputs as well as metadata from the deployments can be obtained upon request from: warren.joyce@dfo-mpo.gc.ca or heather.bowlby@dfo-mpo.gc.ca.

The project (Quoddy Region Pelagics Telemetry) will support the assessment of the effects of aquaculture on the distribution and abundance of pelagic fishes (salmon, mackerel, herring) and large predators (shark, marine mammals) in Passamaquoddy Bay and the Bay of Fundy, an area of intense finfish culture. An acoustic receivers network is placed yearly (from April to December) across various passageways, locations of project-specific interest, and at aquaculture sites in the region. Tagged pelagic species will be tracked through the network to provide information on migration routes, movement speed, survival rates and suspected predators, and determine interaction and residence at aquaculture sites. The network was utilized for monitoring the passage of: hatchery-reared wild salmon (n=340) released in the Magaguadavic River in 2018, 2019 and 2021, wild alewives (n=30) from the St. Croix River in 2021, and farmed Atlantic salmon released in the wild (n=99) in 2021. The receiver network has more recently supported adjacent projects on the use of the region by white shark and porbeagle as well as the residence of mackerel, herring, and sculpin at farm sites. The receivers additionally support other researchers with detection of striped bass, Inner Bay of Fundy Atlantic salmon, sturgeon, and many other species. Placement of the network will continue into 2025 inclusive with the longer-term goal to eventually deploy an array covering the entrance to the Bay of Fundy.Cite this data as: Trudel, M., Wilson, B., Black, M. 2023. Assessing bay-scale impacts of aquaculture operations on the distribution and abundance of pelagic fishes and large predators. Accessed via the Ocean Tracking Network OBIS IPT in January 2025 (version 3.1). https://doi.org/10.14286/xfa6sr

This inventory, conducted from September 26th to October 3th, 2019, aimed to describe the community structure of macroalgae and benthic macroinvertebrates of five small estuaries of the Upper North Shore of Quebec, namely Barthélemy Bay and the Colombier, Mistassini, Franquelin and Saint-Nicolas rivers. This inventory is part of a doctoral study of Valentine Loiseau on the global changes in the St. Lawrence system, mainly the study of marine benthic communities in response to changes of salinity, to ensure proper management of the environment in the face of future changes. The main objective is to describe the structure and the levels of specific diversities of mediolittoral communities of benthic macroinvertebrates and macroalgae along a salinity gradient. These five small estuaries were selected because of their similar size, hard substrates and easy access. Three levels of hypoosmotic stress (low, medium, high) and one control level (seawater) were used for each of the selected estuaries, with eight quadrats per stress level. Quadrat positions were randomly selected but had to meet two criteria: (1) regular height in the foreshore to control the influence of other stresses (temperature, exposure); and (2) presence of at least one macroalga to maintain homogeneity. A percentage cover by macroalgal and macroinvertebrate species was estimated, and then all organisms were weighed by species and size group. The salinity of the nearest water point was measured at mid-tide with a portable refractometer and a Castaway-type CTD (Conductivity-Temperature-Density) probe. The inventory was done using a stratified random sampling design and the sampling unit was a quadrat measuring 25 x 25 cm. The three files provided (DarwinCore format) are complementary and are linked by the "eventID" key. The "event_information" file includes the generic information of the quadrat, including date and location. The "additional_information_event_and_occurrence" file includes salinity and substrate type of the quadrat, as well as the total weight of all individuals of the same species caught in the quadrat extrapolated to one square metre of surface. For nudibranchs and barnacles, weight was estimated from the size of the individuals so that they were not removed from the environment. The "taxon_occurrence" file includes the taxonomic inventory of macroalgal and benthic macroinvertebrate species observed in the quadrat, identified to the lowest possible species or taxonomic level and biomass by identified species.For quality control, organisms were identified on the field using the following guide: Chabot, Robert et Anne Rossignol. 2003. Algues et faune du littoral du Saint-Laurent maritime : Guide d'identification. Institut des Sciences de la mer de Rimouski, Rimouski ; Pêches et Océans Canada (Institut Maurice-Lamontagne), Mont-Joli. 113 pages. The taxonomy was checked against the World Register of Marine Species (WoRMS) to match recognized standards and using the R obistools and worrms libraries. The WoRMS match was placed in the "scientificNameID" field of the occurrence file. All sample locations were spatially validated. This project was funded by DFO Coastal Environmental Baseline Program under Canada’s Oceans Protection Plan. This initiative aims to acquire environmental baseline data contributing to the characterization of important coastal areas and to support evidence-based assessments and management decisions for preserving marine ecosystems.

The layer presents the information on the distribution of eelgrass (Zostera marina) beds in James Bay, Chaleur Bay, Estuary and Gulf of St. Lawrence according to a literature review of documents produced between 1987 and 2009. Additional InformationEelgrass's inventory was produced according to a literature review of the following documents:Calderón, I. 1996. Caractérisation de la végétation et de la faune ichtyenne de la baie de Sept-Îles. Document réalisé par la Corporation de protection de l'environnement de Sept-Îles pour Pêches et Océans Canada. 26p. + 5 annexes.Comité côtier Les Escoumins à la Rivière Betsiamites. 2004. Inventaire de localisation des bancs de zostère marine dans la zone côtière Les Escoumins à la rivière Betsiamites. 9 p.Comité ZIP Côte-Nord du Golfe. 2001. Inventaire du potentiel côtier et marin de la Basse-Côte-Nord. Version préliminaire de rapport sous forme de CD-ROM, Sept-Îles, mars 2001.Comité ZIP de la rive nord de l’estuaire. 2008. Guide d’intervention en matière de protection et de mise en valeur des habitats littoraux d’intérêt de la rive nord de l’estuaire maritime (fiches 14 à 20). 8 p. + 7 fiches + annexe.Conseil Régional de l’Environnement Gaspésie et des Îles-de-la-Madeleine (2004). Inventaire et étude des bancs de zostère marine sur le territoire couvert par les comités de gestion intégrée de la zone côtière de l’Est du Québec. CONSORTIUM GAUTHIER & GUILLEMETTE - G.R.E.B.E. 1992. Description et cartographie des habitats côtiers de la Baie de Hannah jusqu'à la rivière au Castor. Rapport présenté à Hydro-Québec, Complexe Nottaway-Broadback-Rupert (NBR), Vol. 2, Annexe cartographique.Giguère, M., C. Duluc, S. Brulotte, F. Hazel, S. Pereira et M. Gaudet. 2006. Inventaire d’une population d'huître américaine (Crassostrea virginica) dans le Bassin aux Huîtres aux Îles-de-la-Madeleine en 2005. Rapport manuscrit. vi + 21 p.Grant, C. et L. Provencher, 2007. Caractérisation de l’habitat et de la faune des herbiers de Zostera marina (L.) de la péninsule de Manicouagan (Québec). Rapp. tech. can. sci. halieut. aquat. 2772 : viii + 65 p. Groupe Environnement Littoral. 1992. Complexe NBR. La zostère marine. Rapport présenté à la vice-présidence Environnement d'Hydro-Québec. 9 p. + 2 cartes.Harvey, C. et D. Brouard. 1992. Étude exploratoire du barachois de Chandler: aspects biophysiques et contamination. Rapport présenté à Environnement Canada, Direction de la protection de l'environnement région du Québec. 39 p. et annexes.Hazel, François, 2002. Données de terrain prises par F. Hazel, Septembre 2002.Ellefsen, H.-F. 2009. Communication personnelle de Hans-Frédéric Ellefsen (MPO).Jacquaz et coll. 1990. Étude biophysique de l'habitat du poisson de quatre barachois de la baie des Chaleurs.Kedney, G. et P. Kaltenback. 1996. Acquisition de connaissances et mise en valeur des habitats du banc de Portneuf. Document réalisé par la firme Pro Faune pour le Comité touristique de Rivière-Portneuf. 50 pages et 5 annexes.Lalumière, R. 1987. Répartition de la zostère marine (Zostera marina) sur la côte est de la baie James; été 1987. Rapport produit par Gilles Shooner et Associés inc. pour la Société d’énergie de la Baie James. 30 p. et annexes.Lalumière, R., L. Belzile et C. Lemieux. 1992. Étude de la zostère marine le long de la côte nord-est de la baie James (été 1991). Rapport présenté au Service écologie de la SEBJ. 31 p. + carte.Leblanc, J. 2002. Communication personnelle de Judith Leblanc (MPO).Lemieux, C. 1995. Acquisition de connaissances des habitats côtiers dans la région de Rimouski (1995). Rapport du Groupe-Conseil GENIVAR présenté au Ministère des Pêches et des Océans du Canada, Division de la Gestion de l’Habitat du Poisson, 52 pages + 2 annexes.Lemieux, C. et R. Lalumière. 1995. Acquisition de connaissances des habitats côtiers du barachois de Saint-Omer. Rap. du Groupe conseil Genivar inc. pour la DGHP, MPO, 44 pages + 3 ann.Martel, Marie-Claude, Lizon Provencher, Cindy Grant, Hans-Frédéric Ellefsen et Selma Pereira, 2009. Distribution and description of eelgrassbeds in Québec. Fisheries and Oceans Canada, Canadian Science Advisory Secretariat, Research Document 2009/050. 45p. Morin, D. 2009. Communication personnelle de Danièle Morin (MRNF).Naturam Environnement. 1999. Caractérisation biophysique, socio-économique et détermination des enjeux dans un secteur potentiel pour l’identification d’une zone de protection marine pilote: portion ouest de la MRC Manicouagan. Baie-Comeau. 311 p. Pelletier, Claudel. 2003. Communication personnelle de Claudel Pelletier, FAPAQ, lettre en date du 24 février 2003.Pereira, S. 2009. Communication personnelle de Selma Pereira (MPO).Vaillancourt, M.-A. et C. Lafontaine. 1999. Caractérisation de la Baie Mitis. Jardins de Métis et Pêches et Océans Canada. Grand-Métis. 185 p.

A derivative of DFO’s benthic species survey for the Strategic Program for Ecosystem-based Research and Advice (SPERA) (open data record ID: e736c0f0-b19e-4842-903d-28bfc756d48a), this benthic survey funded through the Canadian Healthy Oceans Network (CHONeII) looks at the presence/absence and abundance of two biogenic habitat-forming species that are listed as vulnerable to disturbance in a subset of 50 drift camera transects in the ‘Head Harbour/West Isles Archipelago/The Passages’ Ecologically and Biologically Significant Area (EBSA) in the Bay of Fundy, New Brunswick, Canada (~113km2). Presence/absence and abundance data of the stalked sea squirt (Boltenia ovifera) and horse mussel (Modiolus modiolus) were derived from the use of high-resolution Nikon D800 36.1 megapixel still images (n=2576, see link to parent record for more descriptive survey information) to be used in species distribution modelling. Image field of view (FOV) was estimated using a 10 cm-wide trigger weight for scale,and standardized across images using the average FOV estimate (0.75 x 0.5 m) across a subset of 200 images. Species counts were then converted to abundance estimates (number of individuals per square-meter) by dividing counts by 0.375m2. Boltenia ovifera was observed at densities reaching 456 ind./m2, while Modiolus modiolus density reached a maximum of 240 ind./m2.Cite this data as: Mireault C.A., Lawton P., Devillers R. and Teed L. Presence/absence and abundance of vulnerable marine ecosystem species Boltenia ovifera and Modiolus modiolus in the lower Bay of Fundy derived from high resolution still imagery. Published September 2023. Coastal Ecosystems Science Division, Fisheries and Oceans Canada, St. Andrews, N.B. https://open.canada.ca/data/en/dataset/152ae3f1-d2b9-43d9-a7b4-d769d9e9fc41

This dataset represents abundance data of commercial size Sea Scallop (Placopecten magellanicus; ≥ 80 mm shell height) from 2011-2023 from the Bay of Fundy Inshore Scallop Survey. Data is binned into 5-mm shell height bins, is prorated to an 800 m tow length and 17.5 feet (5.334 m) drag width (i.e., representing an area swept of 4267 m2), and was collected using unlined dredge gear. Each row represents a tow and contains information such as tow date, cruise name, gear type, geographical coordinates (decimal degrees, WGS 84) and the Scallop Production Area in which the tow took place. Survey protocols are documented in Glass (2017). This dataset contains tow data from a comparative survey conducted in 2012 (Smith et al., 2013). Further, these data correspond to the publication of Hebert et al. (2025).ReferencesGlass, A. 2017. Maritimes Region Inshore Scallop Assessment Survey: Detailed Technical Description. Can. Tech. Rep. Fish. Aquat. Sci. 3231: v + 32 p.Hebert, N, Sameoto, J.A., Keith, D.M., Murphy, O.A., Brown, C.J., Flemming, J. 2025. Interannual variability in the length–weight relationship can disrupt the abundance–biomass correlation of sea scallop (Placopecten magellanicus). ICES. J. Mar. Sci. Smith, S.J., Glass, A., Sameoto. J., Hubley, B., Reeves, A., and Nasmith, L. 2013. Comparative survey between Digby and Miracle drag gear for scallop surveys in the Bay of Fundy. DFO Can. Sci. Advis. Sec. Res. Doc. 2012/161. iv + 20 p.Cite this data as: Sameoto, J.A. Data of: Bay of Fundy Sea Scallop Commercial Size Abundance Data. Published: December 2025. Population Ecology Science Division, Fisheries and Oceans Canada, Dartmouth, N.S. https://open.canada.ca/data/en/dataset/ecc09d98-56ed-4a27-ad62-5c3714a1d9b4