From August 2nd to September 9th, 2013, Fisheries and Oceans Canada conducted a baseline survey of marine fishes and their habitats on the Canadian Beaufort Shelf and slope. Sampling was conducted from the F/V Frosti at 64 stations along ten transects. Standardized sampling was conducted on the transects at pre-determined depth stations (20-40, 75, 200, 350, 500, 750, and 1000 m) using a variety of sampling equipment including benthic fishing trawls, plankton nets, sediment cores, and CTD and water sample profiles. A specialized CTD probe (UCTD) was deployed at an additional 72 locations while the ship was underway.Presented here is the information on the sampling locations, and the sampling gear deployed at each station.

Bivalve aquaculture has direct and indirect effects on plankton communities, which are highly sensitive to short-term (seasonal, interannual) and long-term climate changes, although how these dynamics alter aquaculture ecosystem interactions is poorly understood. Here, we investigate seasonal patterns in plankton abundance and community structure spanning several size fractions from 0.2 µm up to 5 mm, in a deep aquaculture embayment in northeast Newfoundland, Canada. Using flow cytometry and FlowCam imaging, we observed a clear seasonal relationship between fraction sizes driven by water column stratification (freshwater input, nutrient availability, light availability, water temperature). Plankton abundance decreased proportionally with increasing size fraction, aligning with size spectra theory. Within the bay, greater mesozooplankton abundance, and a greater relative abundance of copepods, was observed closest to the aquaculture lease. No significant spatial effect was observed for phytoplankton composition. While the months of August to October showed statistically similar plankton composition and size spectra slopes (i.e., food chain efficiency) and could be used for interannual variability comparisons of plankton composition, sampling for longer periods could capture long-term phenological shifts in plankton abundance and composition related to various processes, including climate change. Conclusions provide guidance on optimal sampling to monitor and assess aquaculture pathways of effects.Cite this data as: Sharpe H, Lacoursière-Roussel A, Gallardi D (2024). Ecological insight of seasonal plankton succession to monitor shellfish aquaculture ecosystem interactions. Version 3.2. Fisheries and Oceans Canada. Sampling event dataset. https://doi.org/10.25607/2ujdvh

From August 5th to September 3rd, 2012, Fisheries and Oceans Canada conducted a baseline survey of marine fishes and their habitats on the Canadian Beaufort Shelf and slope. Sampling was conducted from the F/V Frosti at 28 stations along four transects. Standardized sampling was conducted at pre-determined depth stations (20-40, 75, 200, 350, 500, 750, and 1000 m) using a variety of sampling equipment including benthic fishing trawls, plankton nets, sediment cores, and CTD and water sample profiles. A specialized CTD probe (UCTD) was deployed at an additional 30 locations while the ship was underway. Presented here is the information on the sampling locations, and the sampling gear deployed at each station.

Bay-scale empirical demonstrations of how bivalve aquaculture alters plankton composition, and subsequently ecological functioning and higher trophic levels, are lacking. Temporal, inter- and within-bay variation in hydrodynamic, environmental, and aquaculture pressure limit efficient plankton monitoring design to detect bay-scale changes and inform aquaculture ecosystem interactions. Here, we used flow cytometry to investigate spatio-temporal variations in bacteria and phytoplankton (< 20 µm) composition in four bivalve aquaculture embayments. We observed higher abundances of bacteria and phytoplankton in shallow embayments that experienced greater freshwater and nutrient inputs. Depleted nutrient conditions may have led to the dominance of picophytoplankton cells, which showed strong within-bay variation as a function of riverine vs freshwater influence and nutrient availability. Although environmental forcings appeared to be a strong driver of spatio-temporal trends, results showed that bivalve aquaculture may reduce near-lease phytoplankton abundance and favor bacterial growth. We discuss aquaculture pathways of effects such as grazing, benthic-pelagic coupling processes, and microbial biogeochemical cycling. Conclusions provide guidance on optimal sampling considerations using flow cytometry in aquaculture sites based on embayment geomorphology and hydrodynamics.Cite this data as: Sharpe H, Lacoursière-Roussel A, Barrell J (2024). Monitoring bay-scale bivalve aquaculture ecosystem interactions using flow cytometry. Version 1.2. Fisheries and Oceans Canada. Samplingevent dataset. https://ipt.iobis.org/obiscanada/resource?r=monitoring_bay-scale_bivalve_aquaculture_ecosystem_interactions_using_flow_cytometry&v=1.2

Plankton (zooplankton and large phytoplankton) are collected using the Continuous Plankton Recorder (CPR) in the Northwest (NW) Atlantic along tracks transited by container ships from Reykjavik (Iceland) to St. John’s, NL (the Z line), and between St. John’s and the New England Coast, along the Scotian Shelf (the E and MD lines). The CPR Survey is the longest running, most geographically extensive marine ecological survey in the world, providing comparable data on the geographical distribution, seasonal cycles and year-to-year changes in abundance of plankton over a large spatial area. The first northwest Atlantic samples were collected in the Irminger Sea in 1957, and sampling was extended farther west to the Scotian Shelf a few years later. Sampling has continued to the present with some interruptions during the late 1970s and 1980s. Sampling is nominally once per month along the E, MD, and Z lines. DFO Sample collection and analysis are led by the Continuous Plankton Recorder Survey program at the Marine Biological Association of the UK. DFO provides partial support for the northwest Atlantic survey carried out on the E, MD, and Z lines and incorporates CPR data in Atlantic Zone Monitoring Program ocean environmental status reporting.

An exploratory fishery was carried out in the Mackenzie River Delta between 1989 and 1993 at the request of the Inuvik Hunters and Trappers Committee to assess the commercial fishery potential in this area. Data collected during this exploratory fishery was used in two technical reports. Broad whitefish were the target species of this fishery (DFO Technical Report 2180), however other species such as northern pike, inconnu, and lake whitefish were also harvested (DFO Technical Report 2330).Biological data from broad whitefish (fork length, age, gonadosomatic index and instantaneous mortality) were analyzed to assess the impact of an exploratory fishery in the Mackenzie River Delta. The data were collected using variable mesh experimental gill nets and commercial harvesters' 139 mm (5.5”) mesh gill nets. The data suggest that the broad whitefish population might be separated, with larger mature spawners gathering in the main channels prior to spawning and smaller, immature or resting fish staying in side channels away from strong currents. From this analysis we conclude that the size and structure of the broad whitefish population(s) found in this area are stable at the current level of total harvest (commercial and subsistence combined) There may be room for increased harvests but to what level is uncertain.Biological data from northern pike, inconnu, and lake whitefish were analyzed to assess the impact of the fishery on population abundance and structure. All three by catch species support subsistence fisheries in the Mackenzie Delta. lnconnu and lake whitefish migrate substantial distances, crossing land claim borders and are likely fished by a variety of user groups. Northern pike, on the other hand tend to be non-migratory with localized populations that are mainly fished by people living in the near vicinity. A concern was that commercial fishing pressure might reduce the numbers of fish available to subsistence users. Based on trends in size and age frequency, age at maturity, sex ratio, growth rates, and mortality rates, we conclude that inconnu and lake whitefish populations in the Mackenzie Delta have remained healthy and stable at the current harvest levels, however northern pike populations showed a decrease in the proportion of older fish, possibly indicating over-fishing of local stocks. lnconnu and lake whitefish may be able to withstand increased harvest, but to what extent is unknown, given that little reliable information is available on subsistence harvest levels in this region. Increasing harvest levels of pike may be risky and we suggest that a reduction of current commercial harvest quotas be considered.

From August 6th to September 9th, 2014, Fisheries and Oceans Canada conducted a baseline survey of marine fishes and their habitats on the Canadian Beaufort Shelf and slope. Sampling was conducted from the F/V Frosti at 56 stations along thirteen transects, with an additional three stations not located on transects. Standardized sampling was conducted on the transects at pre-determined depth stations (20-40, 75, 200, 350, 500, 750, and 1000 m) using a variety of sampling equipment including benthic fishing trawls, plankton nets, sediment cores, and CTD and water sample profiles. Presented here is the information on the sampling locations, and the sampling gear deployed at each station.

The objective of this project was to gather data to develop a model of the food web of the lower trophic levels of the nearshore area of the Beaufort Sea. Sampling took place from 2005 to 2008 using the CCGS Nahidik. The multidisciplinary character of the Nahidik program produced measurements of biology/ecology (primary production, phytoplankton, zooplankton, benthos, fish), chemical and physical oceanography, contaminants, geology and hydro acoustics. The data were collected in July and August of each year. The Nahidik program provided data to provide a baseline for future studies as well as an information source for environmental assessment.This record contains water chemistry data collected as part of this project including suspended nitrogen, dissolved nitrogen, suspended phosphorus, dissolved phosphorus, dissolved organic carbon, suspended carbon, chlorophyll a, and suspended silicon.

The objective of this project was to gather data to develop a model of the food web of the lower trophic levels of the nearshore area of the Beaufort Sea. Sampling took place from 2005 to 2008 using the CCGS Nahidik. The multidisciplinary character of the Nahidik program produced measurements of biology/ecology (primary production, phytoplankton, zooplankton, benthos, fish), chemical and physical oceanography, contaminants, geology and hydro acoustics. The data were collected in July and August of each year. The Nahidik program provided data to provide a baseline for future studies as well as an information source for environmental assessment. This record contains the geographic coordinates and station names from 2005 to 2008.

Ichthyoplankton surveys were conducted in the Strait of Georgia (British Columbia) during 1979-1981 to ascertain the onset of fish spawning, and to explore distributional pattern and estimate total biomass of fish species.Oblique tows were made using 0.25m2 Bongos equipped with 351 micron Nitex nets of modified SCOR design. All sampling gear was black to minimize potential avoidance and resulting catch bias. The tow procedure generally followed that established by CALCOFI.This dataset contains a compilation of corrected catches of juvenile fishes, fish eggs and fish larvae by station.