A compendium of reports that provide information about aquatic and terrestrial animals and plants, soils, surface water, groundwater and their accompanying data files and maps

The Fish Pathology Program (FPP) located at the Pacific Biological Station in Nanaimo has been assessing the health of aquatic animals since the early 1970’s. Utilizing traditional diagnostic methods, the FPP has supported internal and external clients to provide clinical data and management advice on the health of aquatic animals. The dataset contains information from diagnostic fish health cases coming from the Salmonid Enhancement Program, Research, Public and I&T submissions. Data contained in the database includes pathogen findings from submitted cases from all of the Pacific Region.The publication of The Fish Health Database will comply with public release recommendations documented in recommendation twenty two, made in volume three of the Final Report (October 2012) submitted by the Cohen Commission of Inquiry into the Decline of the Sockeye Salmon in the Fraser River.

Fish Habitat Assessment Output: 8 of 16High Water Level (75.4m ASL) - Juvenile/Adult Habitat - Low Vegetation Association Species (Coldwater) Habitat suitability was assessed for the Bay of Quinte Area of Concern, at a 3 m grid resolution, using the Habitat Ecosystem Assessment Tool (HEAT), temperature algorithms, vegetation models, and water level input. Habitat classifications were based on three variables: depth (elevation), vegetation, and substrate; and modified by temperature suitabilities. The final suitability maps were based on documented habitat and temperature associations for the fish in the area. Different life stages (spawning requirements, nursery habitat, adult habitat) were modeled for the years of 1972-2011. Suitability values were scaled from 0 (not suitable) to 1 (highly suitable) and converted to suitability classes of very low, low, medium, and high. The final maps for each guild – life stage combination are maximum suitability values from the 39-year period modelled.

Fish Habitat Assessment Output: 5 of 16High Water Level (75.4m ASL) - Juvenile/Adult Habitat - High Vegetation Association Species (All Thermal Guilds)Habitat suitability was assessed for the Bay of Quinte Area of Concern, at a 3 m grid resolution, using the Habitat Ecosystem Assessment Tool (HEAT), temperature algorithms, vegetation models, and water level input. Habitat classifications were based on three variables: depth (elevation), vegetation, and substrate; and modified by temperature suitabilities. The final suitability maps were based on documented habitat and temperature associations for the fish in the area. Different life stages (spawning requirements, nursery habitat, adult habitat) were modeled for the years of 1972-2011. Suitability values were scaled from 0 (not suitable) to 1 (highly suitable) and converted to suitability classes of very low, low, medium, and high. The final maps for each guild – life stage combination are maximum suitability values from the 39-year period modelled.

Fish Habitat Assessment Output: 12 of 16Average Water Level (75.0m ASL) - Nursery Habitat - Low Vegetation Association Species (All Temperature Windows)Habitat suitability was assessed for the Bay of Quinte Area of Concern, at a 3 m grid resolution, using the Habitat Ecosystem Assessment Tool (HEAT), temperature algorithms, vegetation models, and water level input. Habitat classifications were based on three variables: depth (elevation), vegetation, and substrate; and modified by temperature suitabilities. The final suitability maps were based on documented habitat and temperature associations for the fish in the area. Different life stages (spawning requirements, nursery habitat, adult habitat) were modeled for the years of 1972-2011. Suitability values were scaled from 0 (not suitable) to 1 (highly suitable) and converted to suitability classes of very low, low, medium, and high. The final maps for each guild – life stage combination are maximum suitability values from the 39-year period modelled.

Fish Habitat Assessment Output: 9 of 16Average Water Level (75.0m ASL) - Spawning Habitat - High Vegetation Association Species (All Temperature Windows)Habitat suitability was assessed for the Bay of Quinte Area of Concern, at a 3 m grid resolution, using the Habitat Ecosystem Assessment Tool (HEAT), temperature algorithms, vegetation models, and water level input. Habitat classifications were based on three variables: depth (elevation), vegetation, and substrate; and modified by temperature suitabilities. The final suitability maps were based on documented habitat and temperature associations for the fish in the area. Different life stages (spawning requirements, nursery habitat, adult habitat) were modeled for the years of 1972-2011. Suitability values were scaled from 0 (not suitable) to 1 (highly suitable) and converted to suitability classes of very low, low, medium, and high. The final maps for each guild – life stage combination are maximum suitability values from the 39-year period modelled.

Fish Habitat Assessment Output: 10 of 16Average Water Level (75.0m ASL) - Spawning Habitat - Low Vegetation Association Species (All Temperature Windows)Habitat suitability was assessed for the Bay of Quinte Area of Concern, at a 3 m grid resolution, using the Habitat Ecosystem Assessment Tool (HEAT), temperature algorithms, vegetation models, and water level input. Habitat classifications were based on three variables: depth (elevation), vegetation, and substrate; and modified by temperature suitabilities. The final suitability maps were based on documented habitat and temperature associations for the fish in the area. Different life stages (spawning requirements, nursery habitat, adult habitat) were modeled for the years of 1972-2011. Suitability values were scaled from 0 (not suitable) to 1 (highly suitable) and converted to suitability classes of very low, low, medium, and high. The final maps for each guild – life stage combination are maximum suitability values from the 39-year period modelled.

The dataset has been used for the Great Lakes Conservation Blueprint Project for Aquatic Biodiversity. It can be used for: * research and aquatic species inventories * environmental impact and monitoring * watershed based resource planning and management * fisheries and other aquatic analysis Official GEO title: Aquatic Ecosystems Classification: Great Lakes Basin - Coast, Streams, Lakes and Wetlands

Fish Habitat Assessment Output: 6 of 16High Water Level (75.4m ASL) - Juvenile/Adult Habitat - Low Vegetation Association Species (Warmwater Guild)Habitat suitability was assessed for the Bay of Quinte Area of Concern, at a 3 m grid resolution, using the Habitat Ecosystem Assessment Tool (HEAT), temperature algorithms, vegetation models, and water level input. Habitat classifications were based on three variables: depth (elevation), vegetation, and substrate; and modified by temperature suitabilities. The final suitability maps were based on documented habitat and temperature associations for the fish in the area. Different life stages (spawning requirements, nursery habitat, adult habitat) were modeled for the years of 1972-2011. Suitability values were scaled from 0 (not suitable) to 1 (highly suitable) and converted to suitability classes of very low, low, medium, and high. The final maps for each guild – life stage combination are maximum suitability values from the 39-year period modelled.

The Great Lakes Fish Biodiversity Science Database is a compilation of fish community and habitat data from DFO Science surveys, primarily related to freshwater fishes of conservation concern in the Great Lakes basin. Data include: sampling site location, date, fish species and counts, and associated habitat information. Project-specific details including purpose/objectives and study methodology are often reported in the DFO Canadian data report of fisheries and aquatic sciences series.