The Department of Fisheries established a survey of demersal juvenile Atlantic cod (*Gadus morhua*) in the nearshore (<10 m deep) in 1959. This survey aimed to characterize the distribution and abundance of juvenile Atlantic cod and was based upon Norway's Flodevigen sampling program which has been conducted continuously since 1919. A 25 m seine was used to sample juvenile Atlantic cod nursery locations on the Avalon Peninsula and Northeast coast of the island of Newfoundland in September and October. The survey continued until 1964 and became known as the Fleming survey, after original initiator Alistair Fleming. The survey was reinstated by Memorial University of Newfoundland from 1992 to 1997. Multiple tows were conducted at a subset of the original 55 Fleming sites located in St. Mary's Bay, Trepassey Bay, the Southern Shore, Conception Bay, Trinity Bay, Bonavista Bay, Gander Bay, New World Island, Fortune Harbour, Badger Bay, Halls Bay and Green Bay.This data set includes several different subsets, some of which span both Fleming Survey periods (1959-1964 and 1992-1997):I. JuvCodCatch60s90s:Catches of juvenile Atlantic cod (1959-1964, 1992-1997) from the first two consecutive tows at each site. This is a summary based on JuvCodLengths90s and FlemingSurveyData60s;II. JuvCodLength90s:Lengths of all individual juvenile Atlantic cod caught for each site (1992-1997);III. SiteEnvData60s90s:Station data for Fleming data 1992-1997;IV. FlemingSurveyData60s:Fleming survey data from 1959-1964 (note there are three record types pertaining to: station data "type 1"; general species catch data including juvenile Atlantic cod grouped by age class ("1+", "Zeroes", and "Total") "type 2; and juvenile Atlantic cod (species 223) listed in length bins "type 3"; andV. FlemingBycatch60s92to96:Bycatch data from 1959-1964 & 1992-1996 from first two tows at each site. This is a summary based partly on the FlemingSurveyData60s set.

Polar cod (Boreogadus saida), Atlantic cod (Gadus morhua), and Greenland cod (Gadus macrocephalus) are prominent gadid species within the northwest Atlantic Ocean in terms of their ecological and socio-economic importance but it is unclear how climate-induced changes in ocean temperature may alter their distributions by the end of the century (2100). We used physiologically based species distribution models to predict how ocean warming will influence the availability of suitable habitat for early life-stages in these marine gadids. We applied CMIP5 ocean temperature projections to egg survival and juvenile growth models for Polar cod, Atlantic cod, and Greenland cod to create predicted suitability raster surfaces for these metrics across four climatology periods (1981–2005, 2026–2050, 2051–2075, 2076–2100). The analysis focused on the projected changes in temperature in ocean shelf areas where ocean depth is ≤400 m. We created an integrated habitat suitability index by combining the suitability surfaces for egg survival and growth potential to predict areas and periods where thermal conditions were suitable for both life stages. The resulting surfaces indicate that suitable thermal habitat for the juvenile life stages of all three species will shift poleward, but the magnitude of the shift and the overall area of thermally suitable habitat remaining will differ across species and life stages through time. Modelled layers are provided in NetCDF format by metric (egg survival, growth potential, habitat suitability). Data layers for Polar cod, Atlantic cod, and Greenland cod are included within each NetCDF file as variables across time. Note that in this study we refer to Gadus macrocephalus/ogac as Greenland cod since Gadus ogac is thought to be a junior synonym of Gadus macrocephalus (Carr et al., 1999). For more details on the methods and results for this analysis see Cote et al. (2021).References:Carr, S. M., Kivlichan, D. S., Pepin, P., & Crutcher, D. C. (1999). Molecular systematics of gadid fishes: implications for the biogeographic origins of Pacific species. Canadian Journal of Zoology, 77(1), 19–26. https://doi.org/10.1139/cjz-77-1-19Cote, D., Konecny, C. A., Seiden, J., Hauser, T., Kristiansen, T., & Laurel, B. J. (2021). Forecasted Shifts in Thermal Habitat for Cod Species in the Northwest Atlantic and Eastern Canadian Arctic. Frontiers in Marine Science, 8(November), 1–15. https://doi.org/10.3389/fmars.2021.764072

This project was completed by the Groundfish Section in the Newfoundland and Labrador Science Branch of Fisheries and Oceans Canada (DFO). From 2018 to 2020, 14 year-round, acoustic receivers were deployed in Placentia Bay as a part of the Coastal Environmental Baseline Program to form 4 gates: Bar Haven (2 receivers), Centre Channel (1 receiver), Eastern Channel (6 receivers), and Western Channel (5 receivers). Additionally, 162 transmitters were deployed in Atlantic cod in the 3Ps region (2019-2022). Over the deployment period these receivers recorded a total of 2 094 024 detections from 63 unique transmitters including 45 Cod tagged through the Groundfish acoustic telemetry program. Most cod detected were tagged in Placentia Bay (43 fish) and many were detected at multiple receivers or multiple years (37 fish). Passive data collection for this project may extend up to 2030. This record contains the locations of the acoustic receivers in Placentia Bay, NL.

The Coastal Oceanography and Ecosystem Research section (DFO Science) reviewed the presence of Cod in the Population Ecology Division (DFO Science) Ecosystem Survey trawls to describe the likelihood of presence. The survey consists of a stratified random design using a bottom trawl. This layer was created for consideration in oil spill response planning.A version of this dataset was created for the National Environmental Emergency Center (NEEC) following their data model and is available for download in the Resources section.Cite this data as: Lazin, G., Hamer, A.,Corrigan, S., Bower, B., and Harvey, C. Data of: Likelihood of presence of Atlantic Cod in Area Response Planning pilot areas. Published: June 2018. Coastal Ecosystems Science Division, Fisheries and Oceans Canada, St. Andrews, N.B. https://open.canada.ca/data/en/dataset/af2bf6c0-481d-4445-bbc6-7a785d2a9aa9

In place since fall 1994, the sentinel fisheries program is the result of a collaboration between Fisheries and Oceans Canada (DFO) and Quebec and Newfoundland commercial fishermen's associations. Under this program, contracts are awarded by tender to fishermen’s associations to carry out fishing activities according to scientific protocols developed by DFO. The main objective of this survey is to collect data that will be used to calculate abundance indices for various fish stocks, including cod, Greenland halibut, Atlantic halibut and rockfish.Description of mobile surveyThe mobile gear sentinel fisheries of the northern Gulf of St. Lawrence are conducted in the sub-division 3Pn and the divisions 4R, 4S and the northern part of the division 4T of the Northwest Atlantic Fisheries Organization (NAFO). This program follows a stratified random survey plan according to depth strata, NAFO divisions and the type of substrate at the bottom. A standard tow is 30 minutes long and made at a speed of 2.5 knots. The fishing gear is a 300 Star Balloon trawl mounted on a Rock Hopper footgear. The trawl mesh size is 145 mm with a liner of 40 mm in the codend. Unless conditions at sea compromise safety during fishing activity, a retaining cable must be used to standardize the horizontal opening between vessels and the various depths fished. Data are collected by observers at sea or by technicians.The data contained in this program are divided into 4 different projects.-The summer series, carried out during the month of July-The fall series, which covers the period from 1995 to 2002-The winter series, to study the mixing between the different stocks-The CRP (Cod reproductive potential) series, which targets the reproductive potential.DataFor each trait, the total catch is sorted and weighed for each species. The number of individuals caught for each unmeasured fish species is noted. Biological data such as length, weight (sampled, per individual, gonad, liver and stomach), age, sex and maturity migth then be collected on a subsample of many species such as Atlantic halibut, Greenland halibut, lumpfish and Atlantic cod, using a variety of protocols. The biological data are divided into 4 files: a “Metadata” file containing set information, a “Catches” file containing catches per set for fish taxa, a “Carbio” file containing biological and morphometric measurements per individual, a “Freql” file containing the length frequency of fish.The data collected as part of this program is available below. It is important to note, however, that 1) only traits deemed successful have been retained; 2) historical data may contain inaccuracies; 3) the most recent survey is not available for validation purposes.

PURPOSE:These data have been updated following a Canadian Science Advice Secretariat (CSAS) Regional Science Advisory Process. Associated publications are available in the citation section below or will be posted on the Fisheries and Oceans Canada (DFO) Science Advisory Schedule as they become available.Determine the stock status of southern Gulf of St. Lawrence Atlantic Cod. DESCRIPTION:The yearly spawning stock biomass estimates of southern Gulf of St. Lawrence Atlantic Cod were obtained using a Statistical Catch-at-Age model as part of the stock assessment to year 2023.The yearly estimates presented come from Markov Chain Monte Carlo (MCMC) simulations. The yearly median estimates are provided, along with uncertainty estimates (2.5th, 25th, 75th and 97.5th percentiles). The values are in thousands of tons of spawning stock biomass. USE LIMITATION:To ensure scientific integrity and appropriate use of the data, we would encourage you to contact the data custodian.

In place since fall 1994, the sentinel fisheries program is the result of a collaboration between Fisheries and Oceans Canada (DFO) and Quebec and Newfoundland commercial fishermen's associations. Under this program, contracts are awarded by tender to fishermen’s associations to carry out fishing activities according to scientific protocols developed by DFO. The main objective of this survey is to collect data that will be used to calculate abundance indices for the northern Gulf of St. Lawrence Atlantic cod stock.Description of fixed gears surveyThe fixed gear sentinel fisheries of the northern Gulf of St. Lawrence are conducted in the sub-division 3Pn and the divisions 4R, 4S of the Northwest Atlantic Fisheries Organization (NAFO) using fixed gillnets or longlines (other fishing gears were also used at the start of the program). Fishing activities with nets must have a mesh size of 5 ½ inches (140mm) and are limited to a maximum of 6 to 20 nets depending on the region and capture and the target immersion time is between 19 to 24 hours. Longline fishing activities, for its part, must be carried out with traditional J #16 or C #12 hooks. The maximum number of hooks varies from 500 to 1000, depending on the catch, and the target immersion time is 4 to 6 hours. Data are collected by observers at sea or by technicians.DataFor each fishing activity, the total catch is sorted and weighed by species. For each species other than Atlantic cod, the number of individuals caught is noted. Atlantic cod are then measured at the fork (cm). Other biological data such as weight (total, gonad, liver and stomach), age, sex and maturity can then be collected on a subsample of cod.The biological data are divided into 4 files: a “Metadata” file containing set information, a “Catches” file containing catches per set for fish taxa, a “Carbio” file containing biological and morphometric measurements per individual, a “Freql” file containing the length frequency of fish.The data collected as part of this program is available below. It is important to note, however, that 1) only traits deemed successful have been retained; 2) historical data may contain inaccuracies; 3) the most recent survey is not available for validation purposes.

Atlantic salmon postsmolts were surveyed via surface trawling during 2001 and 2003. These data were provided to the Coastal Oceanography and Ecosystem Research section of Fisheries and Oceans Canada. These data, and information from subsequent tagging studies were considered to estimate the likelihood of presence of Atlantic salmon within the Area Response Plan regions. Atlantic salmon presence varies seasonally and this spatial information should be used in conjunction with the temporal information in the attribute table.A version of this dataset was created for the National Environmental Emergency Center (NEEC) following their data model and is available for download in the Resources section.Cite this data as: Lazin, G., Hamer, A.,Corrigan, S., Bower, B., and Harvey, C. Data of: Likelihood of presence of Atlantic Salmon in Area Response Planning pilot areas. Published: June 2018. Coastal Ecosystems Science Division, Fisheries and Oceans Canada, St. Andrews, N.B. https://open.canada.ca/data/en/dataset/436cdf90-9d6b-4784-938b-feec48844a67

Fisheries and Oceans Canada (DFO) conducted a winter multidisciplinary scientific surveys with a bottom trawl the northern Gulf of St. Lawrence and Cabot Straight from 1978 to 1994. The specificities of the missions onboard the MV Lady Hammond are described below.Objectives:1. Assess groundfish populations abundance and condition2. Assess environmental conditions3. Conduct a biodiversity inventory of benthic and demersal megafauna4. Collect samples for various research projectsSurvey descriptionThis winter survey covers the northern Gulf of St. Lawrence, that is the divisions 4R, 4S and 3Pn of the Northwest Atlantic Fisheries Organization (NAFO). A stratified random sampling strategy is used for this survey and the fishing gear used on the MV Gadus Atlantica is an Engel 145 Otter trawl. Standard trawling tows last 30 minutes, starting from the time the trawl touches the sea floor. Towing speed is 3.5 knots.DataFor each fishing tow, the catch is sorted and weighed by taxa; individuals are counted and biological data are collected on a subsample. For fish, crab and squid, size and weight are measured by individual and, for some species, sex, gonad maturity, and the weight of certain organs (stomach, liver, gonads) are also evaluated. The soft rays of the anal fin are counted for redfish and otoliths are collected for Greenland halibut and Atlantic cod. Invertebrates are weighted and counted (no individual measurements).The biological data are divided into 4 files: a “Metadata” file containing set information, a “Catches” file containing catches per set for fish taxa, a “Carbio” file containing morphometric measurements per individual and a “Freql” file containing the length frequency of fish. It's important to note that this is raw data. Only sets considered successful are retained. In each set, all species are kept, with a few exceptions. For more information please contact the data management team (gddaiss-dmsaisb@dfo-mpo.gc.ca).

Fisheries and Oceans Canada (DFO) conducts an annual summer multidisciplinary scientific survey with a bottom trawl in the Estuary and the northern Gulf of St. Lawrence since 1984. Over the years this survey has been conducted on four vessels: the MV Lady Hammond (1984-1990), the CCGS Alfred Needler (1990-2005), the CCGS Teleost (2004-2021) and the CCGS Cabot (2022-current). It is important to note that the objectives, the methods used and the identification of the species during these surveys have improved over time in response to DFO requests and mandates. The data are therefore not directly comparable between these surveys. The specificities of the missions onboard the CCGS Alfred Needler are described below.Objectives:1. Assess groundfish and northern shrimp population abundance and condition2. Assess environmental conditions3. Conduct a biodiversity inventory of benthic and demersal megafauna4. Monitor the pelagic ecosystem5. Collect samples for various research projectsSurvey descriptionThe survey covers the divisions 4R, 4S, 3Pn and the northern part of division 4T of the Northwest Atlantic Fisheries Organization (NAFO). This survey follows a stratified random sampling design and the fishing gear used on the CCGS Alfred Needler is a URI shrimp trawl (81'/114'). Standard trawling tows last 25 minutes, starting from the time the trawl touched the sea floor. Towing speed is 3 knots.DataFor each fishing tow, the catch is sorted and weighed by taxa; individuals are then counted and biological data are collected on a subsample. For fish, crab and squid, size and weight are measured by individual and, for some species, sex, gonad maturity, and the weight of certain organs (stomach, liver, gonads) are also evaluated. The soft rays of the anal fin are counted for redfish, and the otoliths are collected for several species such as witch flounder, Atlantic cod, Greenland halibut and Atlantic halibut. A roughly 2-kg shrimp sample is sorted and weighed by species (and by stage of maturity for northern shrimp). The shrimps are measured individually. The other invertebrates are counted (no individual measurements) and photographed.The biological data are divided into 5 files: a “Metadata” file containing set information, a “Catches” file containing catches per set for fish taxa, a “Carbio” file containing biological and morphometric measurements per individual, a “Freql” file containing the length frequency of fish and a “Shrimps” file containing information on shrimp catches.It's important to note that this is raw data. Only sets considered successful are retained. In each set, all species are kept, with a few exceptions. For more information please contact the data management team (gddaiss-dmsaisb@dfo-mpo.gc.ca).