Funded through DFO's Strategic Program for Ecosystem-based Research and Advice (SPERA), this benthic survey covers several seabed areas adjacent to Deer Island and Campobello Island, the Wolves Islands, and Grand Manan (NB) over a two-year study period (2016-2017). One hundred and fifty drift camera transects were completed within the ~91 sq-km study region collecting continuous high-definition video with periodic 4K resolution video (provided by a downward facing Blackmagic Production Camera 4K equipped with video lights). A Nikon D800 36.1 megapixel digital still imagery camera (equipped with a studio strobe light) captured seafloor images at ~30s intervals over a maximum 25-minute drift survey period. The camera was triggered by lowering the camera frame within 1 m of the seabed, releasing tension on a trigger weight suspended below the frame. Camera location was tracked using an ultra-short baseline acoustic positioning system (Tracklink 1500HA transceiver with 1505B transponder on the camera frame). Species presence/absence, abundance, and bottom type was recorded manually using PhotoQuad v1.4 software. An average field of view of 0.7 x 0.5 m was determined from a subset of digital still images within which the 10 cm diameter trigger weight was fully in view. Thirty-eight key and common species were described using explicit taxonomic identifiers, while other species were recorded within broader general categories (e.g. unidentified Cnidaria). Identification was made to the lowest possible taxonomic level. Primary bottom-type was defined as the grain size with the most percent coverage for each image/video interval. Grain size limits were determined using the Wentworth scale.Cite this data as: Lawton P. Benthic Species Presence/Absence in the Lower Bay of Fundy Derived From High Resolution Video and Still Imagery. Published May 2022. Coastal Ecosystems Science Division, Fisheries and Oceans Canada, Dartmouth, N.S.

The objective of benthos monitoring is to know the state of benthic macroinvertebrate communities in rivers according, in particular, to the composition of the substrate and the type of flow. Information on benthic macroinvertebrate samples collected at benthos monitoring stations is classified according to the benthos health index: iSBG for coarse-substrate streams and iSBM for soft-substrate streams. The Benthos Health Index (ISB) is a multimetric index based on benthic macroinvertebrates that assesses the biotic integrity of shallow streams. The benthos monitoring dataset includes a layer of sampling stations sampled between 2003 and 2023 and a layer of drainage areas for each of the types of substrate, either coarse or loose. The drainage area attribute table also provides a compilation of land use by category for the last year available at the time of data production, i.e. the year 2020.**This third party metadata element was translated using an automated translation tool (Amazon Translate).**

The data layer (.shp) presented is the result of an unsupervised classification method for classifying seafloor habitat on German Bank (off South West Nova Scotia, Canada). This method involves separating environmental variables derived from multibeam bathymetry (Slope, Curvature) and backscatter (principal components: Q1, Q2, and Q3) into spatial units (i.e. pixels) and classifying the acoustically separated units into 5 habitat classes (Reef, Glacial Till, Silt, Silt with Bedforms, and Sand with Bedforms) using in situ data (imagery). Benthoscape classes (synonymous to landscape classifications in terrestrial ecology) describe the geomorphology and biology of the seafloor and are derived from elements of the seafloor that were acoustically distinguishable.Unsupervised classifications (acoustic classifications) optimized at 15 classes using Idrisi CLUSTER method (pixel based)Number representing the benthoscape classes (CLASS) derived from in situ imagery and video (See Brown et al., 2012, Figure 3, Table 1).Benthoscape classes (See Brown et al., 2012, Figure 3).Reference:Brown, C. J., Sameoto, J. A., & Smith, S. J. (2012). Multiple methods, maps, and management applications: Purpose made seafloor maps in support of ocean management. Journal of Sea Research, 72, 1–13. https://doi.org/10.1016/j.seares.2012.04.009Cite this data as: Brown, C. J., Sameoto, J. A., & Smith, S. J. Data of: Benthoscape Map of German Bank. Published: February 2021. Population Ecology Division, Fisheries and Oceans Canada, Dartmouth, N.S. https://open.canada.ca/data/en/dataset/b7f81d4a-2cb6-4393-b35b-e536ec63e834

As part of the Musquash Marine Protected Area (MPA) Monitoring Plan, this project was implemented to establish a baseline for infaunal biodiversity for this area. Data collection began in 2010 and contributed monitoring information for productivity, biodiversity, and habitat indicators within the Musquash Harbour. A 1500 cubic centimetre ponar benthic grab was deployed at 30 random stations distributed over three strata (channel, intertidal and subtidal). Samples were to be collected up to three times per year to account for seasonality and annual variation. Once collected the benthic samples were analyzed for changes in grain size, carbon content (Loss on ignition), species abundance/diversity and biomass.Cite this data as: Cooper, J.A., and Blanchard, M. Musquash Benthic Infauna. Published in September 2023. Coastal Ecosystem Science Division, Fisheries and Oceans Canada, St. Andrews, NB.For additional information please see:Cooper, A., Abbott, M., Allard, K., Chang,, B., Courtenay, S., Doherty, P., Greenlaw, M., Ipsen, E., Koropatnick, T., Law, B., Losier, R., Martin, J., Methven, D., and Page, F. 2014. Musquash Estuary Marine Protected Area (MPA): Data Assessment. DFO Can. Sci. Advis. Sec. Res. Doc. 2014/001. v + 57 p.Cooper, J.A., Jones, O. and Blanchard, M. 2023. Review of Baseline Monitoring within the Musquash Estuary Marine Protected Area. DFO Can. Sci. Advis. Sec. Res. Doc. 2023/028. viii + 56 p.Oceans and Coastal Management Division (OCMD). 2015. Musquash Estuary Marine Protected Area Ecosystem Monitoring Plan (2014-2019). Can. Manuscr. Rep. Fish Aquat. Sci. 3077: v+17 pp.DFO. 2022. 2021 Review of Musquash Marine Protected Area Monitoring. DFO Can. Sci. Advis. Sec. Sci. Advis. Rep. 2022/016.

Temperature logger data was collected from two Vemco miniloggers attached to range-testing moorings for an array of acoustic receivers at a depth of approximately 300 metres in the Gully MPA. The data covers 2021 through 2022.Cite this data as: Jeffery, N., Heaslip, S., and Stanley, R. Data of: Benthic temperature data from the Gully MPA. Published: June 2023. Coastal Ecosystems Science Division, Fisheries and Oceans Canada, Dartmouth, N.S. https://open.canada.ca/data/en/dataset/900c02b2-7eb7-48e3-8b3e-c3e65c99a8e6

The data layer (.shp) presented is the result of an unsupervised classification method for classifying seafloor habitat in the Bay of Fundy (Northwest Atlantic, Canada). This method involves separating environmental variables derived from multibeam bathymetry (slope, bathymetric position index), backscatter, and oceanographic information (wave-shear current velocity) into spatial units (i.e. image objects) and classifying the acoustically and oceanographically separated units into 7 habitat classes (Bedrock and Boulders, Mixed Sediments, Gravelly Sand, Sand, Silty Gravel with Anemones, Silt, and Tidal Scoured Mixed Sediments) using in-situ data (imagery). Benthoscape classes (synonymous to landscape classifications in terrestrial ecology) describe the geomorphology and biology of the seafloor and are derived from elements of the seafloor that were acoustically and oceanographically distinguishable. Reference:Wilson, B.R., Brown, C.J., Sameoto, J.A., Lacharite, M., Redden, A. (2021). Mapping seafloor habitats in the Bay of Fundy to assess macrofaunal assemblages associated with Modiolus modiolus beds. Estuarine, Coastal and Shelf Science, 252. https://doi.org/10.1016/j.ecss.2021.107294Cite this data as: Wilson, B.R., Brown, C.J., Sameoto, J.A., Lacharite, M., Redden, A. Bay of Fundy Benthoscape. Published May 2023. Population Ecology Division, Fisheries and Oceans Canada, Dartmouth, N.S. https://open.canada.ca/data/en/dataset/dbabd17a-a2c7-4b3f-9bd8-a77a9c7f9c1c

The North Shore of the Lower Estuary (Upper North Shore, Quebec) is a productive coastal system where many commercial species of benthic invertebrates are fished in the infralittoral (10-20 m) and circalittoral (20-50 m) zone. However, little data exist on the biodiversity of non-commercial species and the environmental characteristics of the benthic habitat in this area. Two scientific surveys were conducted in 2018 and 2019 to address this knowledge gap by developing a framework of biodiversity and environmental (water column and seafloor) data taking that will be used to determine the baseline state of the benthic ecosystem in this region.Surveys were conducted in 2018 (August 11-14) and 2019 (July 30-August 5) in the Upper North Shore region (between the towns of Forestville and Godbout). Surveys followed a fixed sampling design of eight transects perpendicular to bathymetry with stations at 10 m depth intervals in a bathymetry range of 10-50 m for a total of approximately 40 stations per survey. Specimens were collected with a beam trawl with an opening of 2.8 m. The hauls were made at a target speed of 2 knots and a target duration of 7 minutes. Start and end positions were recorded to calculate the distance traveled on each tow using the geosphere library of R. The average tow distance was approximately 425 m. The area covered at each tow was the product of the trawl opening and the distance traveled. The three files provided (DarwinCore format) are complementary and are linked by the "eventID" key. The "event_information" file includes generic event information, including date and location. The "additional_information_event_and_occurrence" file includes sample size, sampling protocol and sampling effort, among others. The "taxon_occurrence" file includes the taxonomy of the species observed, identified to the species or lowest possible taxonomic level. For abundance and biomass estimates, contact Virginie Roy (virginie.roy@dfo-mpo.gc.ca). For quality controls, all taxonomic names were checked against the World Register of Marine Species (WoRMS) to match recognized standards. The WoRMS match was placed in the "scientificNameID" field of the occurrence file. Special cases were noted in "identificationRemarks" and selected specimens were confirmed using field photos. Data quality checks were performed using the R obistools and worrms libraries. All sampling locations were spatially validated.This project was funded by DFO Coastal Environmental Baseline Program under Canada’s Oceans Protection Plan. This initiative aims to acquire environmental baseline data contributing to the characterization of important coastal areas and to support evidence-based assessments and management decisions for preserving marine ecosystems.

Between 2001 and 2004 a descriptive and comparative investigation of the benthic macro-infauna in 17 pockmarks and 10 reference locations outside pockmarks in Passamaquoddy Bay-Bay of Fundy- was made. This dataset contains the locations of the grab samples for each pockmark in the study area, the taxon abundance identified in each sample and the georeferenced video transect from 2004 using a towcam- an underwater, bottom referencing vehicle on which floodlights, analogue video- and digital still-camera were mounted.For more information of the data: Wildish DJ, Akagi HM, McKeown DL, Pohle GW (2008) Pockmarks influence benthic communities in Passamaquoddy Bay, Bay of Fundy, Canada. Mar Ecol Prog Ser 357:51-66. https://www.int-res.com/abstracts/meps/v357/p51-66/

This dataset was developed to document the procedures for acquiring underwater images in the Banc-des-Américains Marine Protected Area (MPA). Its primary objective is to provide a comprehensive inventory of metadata linked to imagery campaigns that allowed us to conduct a basic characterization of the area, and now that are used for ecological monitoring of the benthic habitats within the MPA.Metadata were collected during imagery surveys conducted since 2012, using three main methods: drop cameras on the crest, baited drop stereoscopic cameras on both the crest and plains, and towed cameras on the plains. For each operation are shared the type of gear used, sampling method, date, geographic coordinates, and acquisition depth.The released dataset contains only descriptive information related to the acquisition of images : file identifier, location, sampling methodology, depth, and technical imaging parameters. It does not include image files themselves, visual content, or the results of image analyses.A systematic quality control is applied to ensure completeness and consistency of the metadata: field format standardization, validation of GPS coordinates, verification of dates and recorded depths. Clear instructions guide the recording of metadata to guarantee their reliability for management and scientific monitoring purposes.

This dataset documents the epifauna occurrences collected from 2021 to 2024 during the Canadian Beaufort Sea Marine Ecosystem Assessment (CBS-MEA) conducted by the Department of Fisheries and Oceans (DFO). This scientific program focuses on the integration of oceanography, food web linkages, physical-biological couplings, and spatial and interannual variabilities. The program also aims to expand the baseline coverage of species diversity, abundances, and habitat associations in previously unstudied areas of the Beaufort Sea and Western Canadian Archipelago. The study took place mainly in the Canadian Beaufort Sea and the Amundsen Gulf. Sampling is done along transects at fixed stations in the study area. Catches are collected with a 3 m benthic beam trawl for 10 minutes bottom-contact time at a target speed of 2 knots and with a modified Atlantic Western IIA otter trawl for 20 minutes bottom-contact time at a target speed of 2.9 knots. A total of 32 stations were sampled for epifauna in 2021, 22 in 2022, 23 in 2023 and 22 in 2024, between 22-655 m depth. Epibenthic invertebrates were identified to the lowest taxonomic level possible and photographed. All unknown specimens are frozen. In the lab, the identifications are validated or refined with the photos and the frozen specimens.The data are presented in Darwin Core and are separated in two files:The "Activité_épifaune_CBSMEA_epifauna_event_en" file which contains information about missions, stations and deployments, which are presented under a hierarchical activity structure.The "Occurrence_épifaune_CBSMEA_epifauna_en" file that contains the taxonomic occurrences.