The Shorezone Biobanding Lines are a linear representation of the various types of biota (flora and fauna) and their distribution, or lack thereof, found in the shoreunit.

The Shorezone Biobanding Polygons are an area representation of the various types of biota (flora and fauna) and their distribution, or lack thereof, found in the shoreunit.

The Canadian Aquatic Biomonitoring Network (CABIN) is an aquatic biomonitoring program for assessing the health of fresh water ecosystems in Canada. Benthic macroinvertebrates are collected at a site location and their counts are used as an indicator of the health of that water body. CABIN is based on the network of networks approach that promotes inter-agency collaboration and data-sharing to achieve consistent and comparable reporting on fresh water quality and aquatic ecosystem conditions in Canada. The program is maintained by Environment and Climate Change Canada (ECCC) to support the collection, assessment, reporting and distribution of biological monitoring information. A set of nationally standardized CABIN protocols are used for field collection, laboratory work, and analysis of biological monitoring data. A training program is available to certify participants in the standard protocols. There are two types of sites in the CABIN database (reference and test). Reference sites represent habitats that are closest to “natural” before any human impact. The data from reference sites are used to create reference models that CABIN partners use to evaluate their test sites in an approach known as the Reference Condition Approach (RCA). Using the RCA models, CABIN partners match their test sites to groups of reference sites on similar habitats and compare the observed macroinvertebrate communities. The extent of the differences between the test site communities and the reference site communities allows CABIN partners to estimate the severity of the impacts at those locations. CABIN samples have been collected since 1987 and are organized in the database by study (partner project). The data is delineated by the 11 major drainage areas (MDA) found in Canada and each one has a corresponding study, habitat and benthic invertebrate data file. Links to auxiliary water quality data are provided when available. Visits may be conducted at the same location over time with repeat site visits being identified by identical study name / site code with different dates. All data collected by the federal government is available on Open Data and more partners are adding their data continually. The csv files are updated monthly. Contact the CABIN study authority to request permission to access non open data.

A literature review, focusing on oil sand products (e.g., diluted bitumen), diluents, spill-treating agents, and crude oil toxicology and ecological studies, relevant to the northeast Pacific was compiled as part of the Government of Canada’s World Class Tanker Safety program. Of the 763 references identified, 14 involved diluted bitumen and other heavy crude oils, indicating the need for further research of these products in the marine environment. Diluent research suggests relatively fast evaporation and dispersion times for this component, however high toxicities may pose a threat to marine biota. Historical studies indicate older dispersant formulations had potential ecological implications, therefore newer formulations, which have not been studied in detail, require full assessment. Consistent utilization of toxicology standards remains elusive, hindering species sensitivity analyses. Exxon Valdez literature demonstrates highly variable impacts from a single oil type and the need for baseline data, recovery status, and suitable ecological end-point determination.

BiologicEcologic ISO Feature Dataset symbolization and publication. September 5, 2017.

Species characterization by environmental DNA (eDNA) is a method that allows the use of DNA released into the environment by organisms from various sources (secretions, faeces, gametes, tissues, etc.). It is a complementary tool to standard sampling methods for the identification of biodiversity. This project provides a list of fish and marine mammal species whose DNA has been detected in water samples collected between 2019 and 2021 using the mitochondrial marker MiFish (12S).The surveys were carried out in the summer of 2019 (July 14-18) and (July 30 - August 5), in the fall of 2020 (October 27-28) and in the summer-fall of 2021 (May 31 - June 3 ) and (August 24-25) between Forestville and Godbout (Haute-Côte-Nord). Sampling was carried out between 1-50 meters depth in 91 stations, with 1 to 3 replicates per station. Two liters of water were filtered through a 1.2 µm fiberglass filter. DNA extractions were performed with the DNeasy Blood and Tissues or PowerWater extraction kit (Qiagen). Negative field, extraction and PCR controls were added at the different stages of the protocol. The libraries were prepared either by Génome Québec (2019, 2020) or by the Genomics Laboratory of the Maurice-Lamontagne Institute (2021), then sequenced on a NovaSeq 4000 PE250 system by Génome Québec. The bioinformatics analysis of the sequences obtained was carried out using an analysis pipeline developed in the genomics laboratory. A first step made it possible to obtain a table of molecular operational taxonomic units (MOTU) using the cutadapt software for the removal of the adapters and the R package DADA2 for the filtration, the fusion, removal of chimeras and compilation of data. The MOTUs table was then corrected using the R package metabaR to eliminate the tag-jumping and take contaminants into consideration. Samples showing a strong presence of contaminating MOTUs were removed from the dataset. The MOTUs were also filtered to remove all remaining adapter sequences and also retain only those of the expected size (around 170 bp). Finally, taxonomic assignments were made on the MOTUs using the BLAST+ program and the NCBI-nt database. Taxonomic levels (species, genus or family) were assigned using a best match method (Top hit), with a threshold of 95%. Only assignments at the level of fish and marine mammals were considered, and the taxa detected were compared to a list of regional species, and corrected if necessary. The species detections of the different replicas have been combined.The file provided includes generic activity information, including site, station name, date, marker type, assignment types used for taxa identification, and a list of taxa or species. The list of taxa has been verified by a biodiversity expert from the Maurice-Lamontagne Institute.This project was funded by Fisheries and Oceans Canada's Coastal Environmental Baseline Data Program under the Oceans Protection Plan. This initiative aims to acquire baseline environmental data that contributes to the characterization of significant coastal areas and supports evidence-based assessments and management decisions to preserve marine ecosystems.Data were also published on SLGO platform : https://doi.org/10.26071/ogsl-2239bca5-c24a

This resource documents a dataset of epifauna occurrences collected in 2021 during The Knowledge and Ecosystem-Based Approach in Baffin Bay (KEBABB) program developed by the Department of Fisheries and Oceans Canada (DFO) in collaboration with university partners. The overall objective of KEBABB is to characterize the variability and trends in physical, chemical, and biological oceanographic conditions and food webs supporting fisheries in the connected ecosystems of western Baffin Bay and Lancaster Sound. In 2021, DFO expanded the KEBABB program to Barrow Strait (KEBABS-Knowledge and Ecosystem-Based Approach in Barrow Strait), a key productive area of the Tallurutiup Imanga National Marine Conservation Area. The study took place in the Eastern Canadian Arctic (mainly in Baffin Bay, Davis Strait and Barrow Strait). Sampling is done along transects at fixed stations in the study area. Catches are collected with a 1.5 m Agassiz trawl (5 mm mesh net) for 3 minutes bottom-contact time at a target speed of 1.5 knots and with a 3 m benthic beam trawl (6.4 mm mesh net) for 15 minutes bottom-contact time at a target speed of 3 knots. A total of 16 stations were sampled for epifauna in 2021 between 85-850 m depth. Epibenthic invertebrates are identified to the lowest possible taxonomic level and photographed. All unknown specimens are frozen. In the lab, the identifications are validated or refined with the photos and the frozen specimens.The data are presented in Darwin Core and are separated in two files:The “Activité_épifaune_KEBABB_epifauna_event_en” file which contains information about missions, stations and deployments, which are presented under a hierarchical activity structure.The “Occurrence_épifaune_KEBABB_epifauna_en” file that contains the taxonomic occurrences.Further details on sampling can be found in the following report: Pućko, M., Charette, J., Tremblay P., Brulotte S., St-Denis B., Ciastek S., Hedges, K., Kuzyk, Z., Roy V., and Michel, C. 2022. An ecosystem-based approach in the eastern Arctic: KEBABB/S (Knowledge and Ecosystem-Based Approach in Baffin Bay/Barrow Strait) 2021 expedition report. Can. Manuscr. Rep. Fish. Aquat. Sci. 3250: viii + 58 p. https://publications.gc.ca/collections/collection_2022/mpo-dfo/Fs97-4-3250-eng.pdfUSE LIMITATION:To ensure scientific integrity and appropriate use of the data, we would encourage you to contact the data custodian.

Historical finds of Pristiphora geniculata

This dataset provides wall-to-wall maps of forest structure across Canada's 650 million hectare forested ecosystems for the year 2022, generated at a spatial resolution of 30 m. It is developed within the framework of Canada’s National Terrestrial Ecosystem Monitoring System (NTEMS). Structure estimates include key attributes such as canopy height, canopy cover, and aboveground biomass, derived using a combination of airborne lidar and Landsat-based spectral composites. Structure models were trained using the - lidar-plot framework - (Wulder et al. 2012), which integrates co-located airborne lidar data and ground plot measurements with Landsat time-series composites (Hermosilla et al. 2016). A Nearest Neighbour imputation approach was applied to estimate structural attributes across the full extent of Canada's forested area. These nationally consistent products are intended to support strategic-level forest monitoring and assessment and are not designed for operational forest management.For further details on the methods, accuracy assessment, and source data, see Matasci et al. (2018).Matasci, G., Hermosilla, T., Wulder, M.A., White, J.C., Coops, N.C., Hobart, G.W., Bolton, D.K., Tompalski, P., Bater, C.W., 2018. Three decades of forest structural dynamics over Canada's forested ecosystems using Landsat time-series and lidar plots. Remote Sensing of Environment, 216, 697-714. https://doi.org/10.1016/j.rse.2018.07.024 (Matasci et al. 2018)

This project was completed by the Coastal Environmental Baseline Program (Coastal and Freshwater Ecology Section) in the Newfoundland and Labrador Science Branch of Fisheries and Oceans Canada (DFO). From 2018 to 2022 baseline biological and physical data were collected in Placentia Bay using Atlantic Zone Monitoring Program (AZMP) and Cold Ocean Productivity Experiment (COPE) protocols. Complementary data were collected in the bay using moored CTDs. Where possible, sampling was conducted monthly at 4 sites between May and November to capture broad scale spatial and temporal trends. Additionally, data were collected bi-weekly in April and May, and monthly from June to September at one of these sites to capture finer scale temporal trends, such as spring blooms, in collaboration with Dr. C. McKenzie. Phytoplankton were collected using vertical net tows and niskins. Zooplankton were collected using vertical net tows. CTDs were used to collect physical and biogeochemical water column data including temperature, pressure, salinity, depth, chlorophyll-a, turbidity, dissolved oxygen, pH, photosynthetic active radiation (PAR), fluorescent dissolved organic matter (FDOM), and conductivity. Water biogeochemistry data were obtained by collecting water samples with niskins at depths of 5, 10, 20, 30, 40m, and 10m above bottom to measure nutrients, chlorophyll-a, carbonates, and particulate organic carbon and nitrogen (POC/PON). Additionally, eDNA samples were taken at each of the 4 sampling sites. This record contains the geographic locations of the sites, and information on the timing and type of data collected at each site.