Herring Permanent Spawn Transects (geodatabase) - used for herring spawn survey program and spatial analysis/presentation of spawn data from Herring Stock Assessment Database (including creation of spawn polygons).

Species characterization by environmental DNA (eDNA) is a method that allows the use of DNA released into the environment by organisms from various sources (secretions, faeces, gametes, tissues, etc.). It is a complementary tool to standard sampling methods for the identification of biodiversity. This project provides a list of fish and marine mammal species whose DNA has been detected in water samples collected between 2019 and 2021 using the mitochondrial marker MiFish (12S).The surveys were carried out in the summer of 2019 (July 14-18) and (July 30 - August 5), in the fall of 2020 (October 27-28) and in the summer-fall of 2021 (May 31 - June 3 ) and (August 24-25) between Forestville and Godbout (Haute-Côte-Nord). Sampling was carried out between 1-50 meters depth in 91 stations, with 1 to 3 replicates per station. Two liters of water were filtered through a 1.2 µm fiberglass filter. DNA extractions were performed with the DNeasy Blood and Tissues or PowerWater extraction kit (Qiagen). Negative field, extraction and PCR controls were added at the different stages of the protocol. The libraries were prepared either by Génome Québec (2019, 2020) or by the Genomics Laboratory of the Maurice-Lamontagne Institute (2021), then sequenced on a NovaSeq 4000 PE250 system by Génome Québec. The bioinformatics analysis of the sequences obtained was carried out using an analysis pipeline developed in the genomics laboratory. A first step made it possible to obtain a table of molecular operational taxonomic units (MOTU) using the cutadapt software for the removal of the adapters and the R package DADA2 for the filtration, the fusion, removal of chimeras and compilation of data. The MOTUs table was then corrected using the R package metabaR to eliminate the tag-jumping and take contaminants into consideration. Samples showing a strong presence of contaminating MOTUs were removed from the dataset. The MOTUs were also filtered to remove all remaining adapter sequences and also retain only those of the expected size (around 170 bp). Finally, taxonomic assignments were made on the MOTUs using the BLAST+ program and the NCBI-nt database. Taxonomic levels (species, genus or family) were assigned using a best match method (Top hit), with a threshold of 95%. Only assignments at the level of fish and marine mammals were considered, and the taxa detected were compared to a list of regional species, and corrected if necessary. The species detections of the different replicas have been combined.The file provided includes generic activity information, including site, station name, date, marker type, assignment types used for taxa identification, and a list of taxa or species. The list of taxa has been verified by a biodiversity expert from the Maurice-Lamontagne Institute.This project was funded by Fisheries and Oceans Canada's Coastal Environmental Baseline Data Program under the Oceans Protection Plan. This initiative aims to acquire baseline environmental data that contributes to the characterization of significant coastal areas and supports evidence-based assessments and management decisions to preserve marine ecosystems.Data were also published on SLGO platform : https://doi.org/10.26071/ogsl-2239bca5-c24a

Atlantic herring. Concentration, breeding areas and larval retention areas of Atlantic Herring in the St. Lawrence Estuary.Data extracted from the Fish Habitat Management Information System (FHAMIS).Concentration areas, spawning sites and breeding areas of Atlantic herring according to a literature review of documents produced between 1977 and 1998.

Fecundity of Atlantic herring (Clupea harengus) was estimated within five spawning areas (German Bank, Scots Bay, Seal Island, Southern Shore Nova Scotia, and Eastern Shore Nova Scotia) in Northwest Atlantic Fisheries Organization (NAFO) areas 4WX in 2019 and 2020. The objective of this project was to describe the fecundity-at-size (weight, length, and age) relationships among spawning grounds, compare these relationships to historical fecundity-at-size relationships, and assess the influence of changes in weight-at-age and fecundity over time to the reproductive potential of a unit of spawning stock biomass.Cite this data as: Barrett T. Data of: Fecundity of Herring in Divisions 4WX. Published: September 2021. Population Ecology Division, Fisheries and Oceans Canada, St. Andrews, N.B. https://open.canada.ca/data/en/dataset/e39b1318-c9f7-4686-b5e5-7d838c8ac99a

Historical finds of Profenusa thomsoni

Speckled Dace (Rhinichthys osculus) are listed under the Species at Risk Act (SARA) as endangered. These fresh water fish, of the family Cyprinidae, are found in Canada only in the Kettle Valley of British Columbia. Proposed critical habitat was based on minimum viable population analysis and assumed densities of fish. From October 19th to the 22nd of 2015, night time pole seining surveys were conducted to enumerate Speckled Dace in proposed critical habitat on the West Kettle River; one of three rivers containing Speckled Dace. The estimated population abundance of Speckled Dace within the survey area was 8,978 (6,143-11,814), however only 1,014 of these are estimated to be adults.

Bluefin tuna landings are reported to the Department of Fisheries and Oceans and stored in the Maritime Fishery Information System Database. This database was queried in January 2016 for all reported landings of Bluefin tuna in coastal Nova Scotia. Longline data was excluded due to location uncertainties associated with the gear. Bluefin tuna sightings are also reported opportunistically to the DFO Whale Sightings Database. The Coastal Oceanography and Ecosystem Research section considered these landings and sightings to estimate the presence of Bluefin tuna within the Area Response Plan areas. Bluefin tuna presence varies seasonally and this spatial information should be used in conjunction with temporal information.A version of this dataset was created for the National Environmental Emergency Center (NEEC) following their data model and is available for download in the Resources section.Cite this data as: Lazin, G., Hamer, A.,Corrigan, S., Bower, B., and Harvey, C. Data of: Likelihood of presence of Bluefin Tuna in Area Response Planning pilot areas. Published: June 2018. Coastal Ecosystems Science Division, Fisheries and Oceans Canada, St. Andrews, N.B. https://open.canada.ca/data/en/dataset/0c3b25df-f831-43e8-a8ac-336e1467c4fe

Distribution of kelp beds in coastal British Columbia. Attribute information includes relative abundance, species, biomass and density of the beds. CRIMS is a legacy dataset of BC coastal resource data that was acquired in a systematic and synoptic manner from 1979 and was intermittently updated throughout the years. Resource information was collected in nine study areas using a peer-reviewed provincial Resource Information Standards Committee consisting of DFO Fishery Officers, First Nations, and other subject matter experts. There are currently no plans to update this legacy data.

The RADARSAT Constellation is the evolution of the RADARSAT Program with the objective of ensuring data continuity, improved operational use of Synthetic Aperture Radar (SAR) and improved system reliability. The three-satellite configuration provides daily revisits of Canada's vast territory and maritime approaches, as well as daily access to 90% of the world's surface.RCM is tasked solely by the Government of Canada, to acquire data, first and foremost in support of Government of Canada services and needs. RCM data and services contributes to ensuring the safety and security of Canadians; monitoring and protecting the environment; monitoring of climate change; managing Canada’s natural resources; and stimulating innovation, research and economic development. In addition to these core user areas, there are expected to be a wide range of ad hoc uses of RADARSAT Constellation data in many different applications within the public and private sectors, both in Canada and internationally. The current data set reflects the acquisition plans that are designed to meet the RCM SAR imaging demands of the Government of Canada. These are being made available publicly in advance of the acquisitions. To meet the data needs of the Government of Canada, acquisitions may be changed without notice. After their acquisition and processing, the RCM image products listed in the current data set, will be delivered to the Earth Observation Data Management System - EODMS (https://www.eodms-sgdot.nrcan-rncan.gc.ca/index-en.html) portal of Natural Resources Canada. Users can register to the EODMS portal as public users to retrieve the RCM image products. For those requiring a greater access to RCM imagery consisting of product types or spatial resolutions not available to public users: you may apply to upgrade your public account to an ‘RCM external vetted entity’ EODMS user type account. For more information on this process, please contact the Canadian Space Agency using the information available at the following link : https://www.asc-csa.gc.ca/eng/satellites/radarsat/access-to-data/how-to-become-a-user.aspPublication frequency :I. Future acquisition plans are published every two weeks for a two-week window that starts two weeks from the publication date. As an example, acquisition plan published on April 1st covers acquisitions from April 14 to 27. The next plan is published on April 14th and covers from April 28 to May 11.II. Past acquisitions plans are published monthly and covers a period of one month from the first to the last day As an example, acquisition plan published on April 1st covers acquisition made between the March 1 and March 31. The next plan covers the month of April.

The Department of Fisheries established a survey of demersal juvenile Atlantic cod (*Gadus morhua*) in the nearshore (<10 m deep) in 1959. This survey aimed to characterize the distribution and abundance of juvenile Atlantic cod and was based upon Norway's Flodevigen sampling program which has been conducted continuously since 1919. A 25 m seine was used to sample juvenile Atlantic cod nursery locations on the Avalon Peninsula and Northeast coast of the island of Newfoundland in September and October. The survey continued until 1964 and became known as the Fleming survey, after original initiator Alistair Fleming. The survey was reinstated by Memorial University of Newfoundland from 1992 to 1997. Multiple tows were conducted at a subset of the original 55 Fleming sites located in St. Mary's Bay, Trepassey Bay, the Southern Shore, Conception Bay, Trinity Bay, Bonavista Bay, Gander Bay, New World Island, Fortune Harbour, Badger Bay, Halls Bay and Green Bay.This data set includes several different subsets, some of which span both Fleming Survey periods (1959-1964 and 1992-1997):I. JuvCodCatch60s90s:Catches of juvenile Atlantic cod (1959-1964, 1992-1997) from the first two consecutive tows at each site. This is a summary based on JuvCodLengths90s and FlemingSurveyData60s;II. JuvCodLength90s:Lengths of all individual juvenile Atlantic cod caught for each site (1992-1997);III. SiteEnvData60s90s:Station data for Fleming data 1992-1997;IV. FlemingSurveyData60s:Fleming survey data from 1959-1964 (note there are three record types pertaining to: station data "type 1"; general species catch data including juvenile Atlantic cod grouped by age class ("1+", "Zeroes", and "Total") "type 2; and juvenile Atlantic cod (species 223) listed in length bins "type 3"; andV. FlemingBycatch60s92to96:Bycatch data from 1959-1964 & 1992-1996 from first two tows at each site. This is a summary based partly on the FlemingSurveyData60s set.