We evaluated an autonomous environmental DNA sampler produced by Dartmouth Ocean Technologies Inc (Dartmouth, Canada) compared to time-at-sample filtration in the laboratory to determine the performance of moored samplers for monitoring in the marine world. We deployed three autonomous samplers from DOT in the Bedford Basin (Canada) over a nine-week period in summer/fall 2023. The samplers filtered seawater in situ at programmed interviews over this time period, and we collected contemporaneous samples with a standard vacuum pump during each sampling period. Both eDNA sample types captured similar fish diversity, including typical diversity for the Northwest Atlantic. The invertebrate community detected using the COI marker was different between each sample type, likely due to differences in filter pore size. We found biofouling on the moored samplers was minimal over the study period, even in a high-traffic area such as the Bedford Basin, likely due to the relatively short experimental period, and copper screening covering in the inlet and outlet valves of the instruments. Overall, our results show promise to deploy autonomous eDNA samplers in marine conservation areas to contribute to monitoring in the temperate ocean, but further testing over longer periods of time is needed to determine if DNA remains well-preserved in the autonomous samplers at ambient ocean temperatures.Cite this data as: Jeffery, N.W., Van Wyngaarden, M., and Stanley, R.R.E. Evaluating an Autonomous eDNA Sampler for Marine Environmental Monitoring: Short- and Long-Term Applications. Published: December 2024. Coastal Ecosystems Science Division, Maritimes Region, Fisheries and Oceans Canada, Dartmouth NS.

From August 5th to September 3rd, 2012, Fisheries and Oceans Canada conducted a baseline survey of marine fishes and their habitats on the Canadian Beaufort Shelf and slope. Sampling was conducted from the F/V Frosti at 28 stations along four transects. Standardized sampling was conducted at pre-determined depth stations (20-40, 75, 200, 350, 500, 750, and 1000 m) using a variety of sampling equipment including benthic fishing trawls, plankton nets, sediment cores, and CTD and water sample profiles. A specialized CTD probe (UCTD) was deployed at an additional 30 locations while the ship was underway. Presented here is the information on the sampling locations, and the sampling gear deployed at each station.

From August 2nd to September 9th, 2013, Fisheries and Oceans Canada conducted a baseline survey of marine fishes and their habitats on the Canadian Beaufort Shelf and slope. Sampling was conducted from the F/V Frosti at 64 stations along ten transects. Standardized sampling was conducted on the transects at pre-determined depth stations (20-40, 75, 200, 350, 500, 750, and 1000 m) using a variety of sampling equipment including benthic fishing trawls, plankton nets, sediment cores, and CTD and water sample profiles. A specialized CTD probe (UCTD) was deployed at an additional 72 locations while the ship was underway.Presented here is the information on the sampling locations, and the sampling gear deployed at each station.

From August 6th to September 9th, 2014, Fisheries and Oceans Canada conducted a baseline survey of marine fishes and their habitats on the Canadian Beaufort Shelf and slope. Sampling was conducted from the F/V Frosti at 56 stations along thirteen transects, with an additional three stations not located on transects. Standardized sampling was conducted on the transects at pre-determined depth stations (20-40, 75, 200, 350, 500, 750, and 1000 m) using a variety of sampling equipment including benthic fishing trawls, plankton nets, sediment cores, and CTD and water sample profiles. Presented here is the information on the sampling locations, and the sampling gear deployed at each station.

To better understand patterns of temporal and spatial variation of fish assemblages in offshore waters of Lake Winnipeg (Manitoba, Canada), pelagic trawl tows were conducted at lakewide monitoring stations since 2002. Trawl samples collected during spring, summer, and fall from the south basin, channel, and north basin were used to study effects of season and geographic region within the lake on species biomass estimates.

Moored instrument time series data include current velocity, temperature, salinity, oxygen, fluorescence, transmissivity, turbidity, sediment trap data and particle capture of carbon, nitrogen, and silicon.These data were collected by researchers from the Institute of Ocean Sciences, Sidney, BC, from locations in the North Pacific.The data links below are only a representative sample of the entire collection. If you require more data, please send your request to the data contact.

Nekton assemblages in Zostera marina beds and adjacent bare soft-sediments were sampled on the south and eastern shore of Nova Scotia. Sampling gear used were visual snorkel transects and a benthic beam trawl. Fish were identified and size either measured (trawl) or estimated in situ (snorkel transects). Surveys were conducted in mid-July to August in summer of 2013 and 2014 across multiple sampling sites. Multiple replicate transects were conducted at each site. Raw abundances from observations were transformed into young of year (YOY) equivalent abundance, and then into density of each species calibrated to account for the sampling equipment and day/night differences.Cite this data as: Wong, M. C. Data of: Fish and large decapods in eelgrass (Zostera marina) beds on the Atlantic coast of Nova Scotia, Canada. Published: April 2020. Coastal Ecosystems Science Division, Fisheries and Oceans Canada, Dartmouth, N.S. https://open.canada.ca/data/en/dataset/dbc56f11-4a97-45e7-99f4-71966b51630c

PURPOSE:From August 1st to September 11th, 2014, Fisheries and Oceans Canada conducted a baseline survey of marine fishes and their habitats in the southern Canadian Beaufort Sea and Amundsen Gulf as part of the Beaufort Regional Environmental Assessment (BREA) called the Beaufort Sea Marine Fishes Project (BSMFP). Sampling was conducted from the F/V Frosti at 54 stations along 14 transects. Standardized sampling was conducted at pre-determined depth stations (20-1500 m) using benthic trawling nets. The BSMFP is the first research project to use large research trawls to assess the biodiversity and abundance of offshore marine fishes in this area. In total, 42 species of fish were caught. This report contains information on fishing net deployments, catch per unit effort (CPUE), and basic biological data for all fishes caught.DESCRIPTION:Basic biological data for all fish caught during the 2014 BSMFP expedition. Includes identification, weight, length (total, fork, and, standard), liver weight, gonad weight, sex and maturity level. PARAMETERS COLLECTED:familyspeciesweighttotal lengthfork lengthstandard lengthliver weightgonad weightsexmaturitySAMPLING METHODS:Various trawl types.

Layer that includes the known information on the american shad breeding areas in the St. Lawrence River and Estuary according to a literature review of documents produced between 1976 and 1997.Additional InformationAmerican shad's breeding areas were produced according to a literature review of the following documents:Blais, J.-P. et V. Legendre. 1976. La ouananiche, Salmo salar, du lac Tremblant, Québec. Québec, Ministère du Loisir, de la Chasse et de la Pêche, Direction régionale de Montréal, Rapp. tech. 06-11, 116 p.Boulet, M., J. Leclerc et P. Dumont. 1995. Programme triennal d'étude sur le suceur cuivré. Québec, Ministère de l'Environnement et de la Faune, Service de l'aménagement et de l'exploitation de la faune, Montréal, Rapp. d'étape, 61 p.Boulet, M., Y. Chagnon et J. Leclerc. 1996. Recherche et caractérisation des aires de fraye des suceurs cuivré et ballot au bief d'aval du barrage de Saint-Ours (rivière Richelieu) en 1992. Québec, Ministère de l'Environnement et de la Faune, Service de l'aménagement et de l'exploitation de la faune, Longueuil, Rapp. trav. 06-38, xi + 37 p.Dumont, P. et R. Fortin. 1977. Relations entre les niveaux d'eau printaniers et la reproduction du Grand Brochet du Haut-Richelieu et de la baie Missisquoi. Université du Québec à Montréal, Département des sciences biologiques, pour le Bureau international Champlain Richelieu, Comité d'impact sur l'environnement, x + 108 p.Dumont, P. et S. Desjardins. 1989. Lettre adressée à M. André Poulin du Département de géographie, Université de Sherbrooke, au sujet de la faune et les habitats de la portion aval de la rivière aux Brochets. Québec, Ministère du Loisir, de la Chasse et de la Pêche, Direction régionale de Montréal. Dumont, P., J. Leclerc et L. Bouthillier. 1989a. Données d'inventaire, baie Brazeau, rivière des Outaouais, été 1989. Québec, Ministère du Loisir, de la Chasse et de la Pêche, Service de l'aménagement et de l'exploitation de la faune, Montréal. [Données non publiées].Environnement Illimité inc. 1994. Centrale Les Cèdres - Nouvel aménagement. Avant-projet phase 2, études environnementales. Description du milieu biologique. Volumes 1 et 2. Rapport préparé pour la Vice-Présidence Environnement Hydro-Québec, Service production, réfection et localisation, 241 p. + annexes.Fournier, P. et L.-M. Soyez. 1988. Étude de l'utilisation faunique printanière du marais de Rosemère. Québec, Ministre du Loisir, de la Chasse et de la Pêche, Service de l'aménagement et de l'exploitation de la faune, Montréal, 13 p.Gagnon, M., Y. Ménard et J.-F. La Rue. 1993. Caractérisation et évaluation des habitats du poisson dans la zone de transition saline du Saint-Laurent. Rapp. tech. can. sci. halieut. aquat. 1920: viii + 104 p.Gendron, M. 1986. Rivière-des-Prairies. Aménagement d'un haut-fond, printemps 1986. Groupe de recherche SEEEQ ltée pour la Direction Environnement d'Hydro-Québec, 103 p.Gendron, M. 1987. Rivière-des-Prairies. Suivi de l'aménagement d'un haut-fond, printemps 1987. Le Groupe de recherche SEEEQ ltée pour la Direction Environnement d'Hydro-Québec, 60 p.Gendron, M. 1988. Rivière-des-Prairies. Suivi de l'aménagement du haut-fond, synthèse 1982-1988. Le Groupe de recherche SEEEQ ltée pour le Service de recherche en environnement et santé publique, Vice-Présidence Environnement, Hydro-Québec, 95 p.Guay, G. et M. Couillard. 1985. Étude de l'utilisation printannière et autonmale des rapides de Lachine par les poissons. Environnement Illimité inc. pour le Secrétariat Archipel, 167 pages + annexes.Laramée, P. 1983. La vie printanière dans les rapides de Lachine : Reproduction des poissons. Éco-Recherches inc. pour Vice-Présidence Environnement Hydro-Québec et le Secrétariat Archipel, 30 p. + 7 annexes. Leclerc, J. 1983. La montaison de l'Alose savoureuse dans la rivière des Mille Iles en 1983. Rapport réalisé par Bio-Conseil inc. pour le compte du Service des études hydrauliques et écologiques, Ministère de l'Environnement du Québec, 45 p.Letendre, M., B. Dumas et M. Beaudoin. 1990. Inventaire de la rivière des Prairies, au niveau de l'île de Pierre. Québec, Ministère du Loisir de la Chasse et de la Pêche, Service de l'aménagement et de l'exploitation de la faune, Montréal. [Travaux en cours].Provost, J., L. Verret et P. Dumont. 1984. L'Alose savoureuse au Québec : synthèse des connaissances biologiques et perspectives d'aménagement d'habitats. Canada, Ministère des Pêches et Océans, Direction de la recherche sur les pêches, Laboratoire de Québec, Rapport manuscrit canadien des sciences halieutiques et aquatiques no 1793, xi + 114 p.Thérrien, J., H. Marquis, G Shooner et P. Bérubé.1991. Caractérisation des habitats recherchés pour la fraie des principales espèces de poisson du fleuve Saint-Laurent (Cornwall à Montmagny). Étude réalisée pas le Groupe Environnement Shooner inc. Pour le compte du Ministère des Pêches et des Océans du Canada. 16 p.

In 2015, a spawning ground acoustic survey that follows the design of the fishery-independent acoustic survey was initiated. This survey is the result of a partnership between DFO and fishery associations. The survey design uses random parallel transects within predefined strata. Surveys are conducted by fishermen in the fall fishing season according to protocols developed by DFO. The survey is conducted at night, during the weekend fishery closures except in Herring fishing area 16C and 16E in 2015 to 2017, where this region didn’t have weekend closures. The spawning ground acoustic survey is meant to provide a nightly estimate of spawning biomass among regions. It is analyzed in the same manner as the fishery-independent acoustic survey. The catches from the experimental nets are used to calibrate the spawning group specific target strength in order to obtain the nightly estimates of spawning biomass.