Records of marine mammal sightings (N = 5,324) collected by ASOs and submitted to Fisheries and Oceans Canada (DFO) between 1979-2024, across three DFO regions: the Arctic, Newfoundland and Labrador, and the Maritimes. Methods for initial data compilation are provided in the associated technical report "Marine mammal records collected by the at-sea observer (ASO) program in Arctic, Newfoundland and Labrador, and Maritimes regions: a summary of challenges and opportunities for future research." Cite this data as: Feyrer, L.J., Colbourne, N., Lawson, J.W., Moors-Murphy, H.B., Ferguson, S. Dataset update to Marine mammal records collected by the At-Sea Observer program in Arctic, Newfoundland and Labrador and Maritimes regions. Published: February 2025. Ocean Ecosystems Science Division, Fisheries and Oceans Canada, Dartmouth, N.S.

11 tagged Blue whales (Balaenoptera musculus) were tracked during the daytime movements as well as the feeding behaviour in the St. Lawrence River estuary. Kernel density was applied to derminate the high density feeding areas of all individuals combined (30, 40, 50, 60, 75, 95 %).Doniol-Valcroze T, Lesage V, Giard J, Michaud R, 2012. Challenges in marine mammal habitat modelling: evidence of multiple foraging habitats from the identification of feeding events in blue whales. Endang Species Res, Vol. 17 : 255–268, doi : 10.3354/esr00427(English version only)

This data record contains a digitized map reproduced from the original Passamaquoddy Marine Resource Pilot Study - 1982 Fisheries. The original map was produced by the Maritime Resource Management Service, using its GEO-BASED SYSTEM: an automated geographic information system used to create data bases and to manipulate and plot information for numerous natural resource applications. The original map is a product of the GEO-BASED SYSTEM and a conventional phot mechanical process. The fisheries information was extracted from a marine data base gathered by A.C.R.I.C. on behalf of the federal Department of Fisheries and Oceans, Parks Canada adn the New Brunswick Department of Fisheries, encompassing the Passamaquoddy region of the Bay of Fundy.Cite this data as: Maritime Resource Management Service 1982. Passamaquoddy Fisheries Marine Pilot Study -1982. Atlantic Coastal Resource Information Centre, Amherst, NS. Published: June 2026. Coastal Ecosystems Science Division, Maritimes Region, Fisheries and Oceans Canada, Dartmouth NS.

Species characterization by environmental DNA (eDNA) is a method that allows the use of DNA released into the environment by organisms from various sources (secretions, faeces, gametes, tissues, etc.). It is a complementary tool to standard sampling methods for the identification of biodiversity. This project provides a list of fish and marine mammal species whose DNA has been detected in water samples collected between 2019 and 2021 using the mitochondrial marker MiFish (12S).The surveys were carried out in the summer of 2019 (July 14-18) and (July 30 - August 5), in the fall of 2020 (October 27-28) and in the summer-fall of 2021 (May 31 - June 3 ) and (August 24-25) between Forestville and Godbout (Haute-Côte-Nord). Sampling was carried out between 1-50 meters depth in 91 stations, with 1 to 3 replicates per station. Two liters of water were filtered through a 1.2 µm fiberglass filter. DNA extractions were performed with the DNeasy Blood and Tissues or PowerWater extraction kit (Qiagen). Negative field, extraction and PCR controls were added at the different stages of the protocol. The libraries were prepared either by Génome Québec (2019, 2020) or by the Genomics Laboratory of the Maurice-Lamontagne Institute (2021), then sequenced on a NovaSeq 4000 PE250 system by Génome Québec. The bioinformatics analysis of the sequences obtained was carried out using an analysis pipeline developed in the genomics laboratory. A first step made it possible to obtain a table of molecular operational taxonomic units (MOTU) using the cutadapt software for the removal of the adapters and the R package DADA2 for the filtration, the fusion, removal of chimeras and compilation of data. The MOTUs table was then corrected using the R package metabaR to eliminate the tag-jumping and take contaminants into consideration. Samples showing a strong presence of contaminating MOTUs were removed from the dataset. The MOTUs were also filtered to remove all remaining adapter sequences and also retain only those of the expected size (around 170 bp). Finally, taxonomic assignments were made on the MOTUs using the BLAST+ program and the NCBI-nt database. Taxonomic levels (species, genus or family) were assigned using a best match method (Top hit), with a threshold of 95%. Only assignments at the level of fish and marine mammals were considered, and the taxa detected were compared to a list of regional species, and corrected if necessary. The species detections of the different replicas have been combined.The file provided includes generic activity information, including site, station name, date, marker type, assignment types used for taxa identification, and a list of taxa or species. The list of taxa has been verified by a biodiversity expert from the Maurice-Lamontagne Institute.This project was funded by Fisheries and Oceans Canada's Coastal Environmental Baseline Data Program under the Oceans Protection Plan. This initiative aims to acquire baseline environmental data that contributes to the characterization of significant coastal areas and supports evidence-based assessments and management decisions to preserve marine ecosystems.Data were also published on SLGO platform : https://doi.org/10.26071/ogsl-2239bca5-c24a

In 2016-17, DFO Maritimes Region undertook a Marine Protected Area (MPA) network analysis for the Scotian Shelf-Bay of Fundy Bioregion. The analysis considered available bioregional-scale ecological and human use data in an effort to identify a draft MPA network design that would protect biodiversity while minimizing any potential impacts on commercial fishing and other industries. The data layers used for the offshore component of the MPA network analysis are provided here. These layers are not presented in their original forms and were modified (e.g. clipped, reclassified, etc.) specifically for use in the MPA network analysis. They should not be used for any other purpose. Please see Serdynska et al. 2021 for details on how each layer was created.Serdynska, A.R., Pardy, G.S., and King, M.C. 2021. Offshore Ecological and Human Use Information considered in Marine Protected Area Network Design in the Scotian Shelf Bioregion. Can. Tech. Rep. Fish. Aquat. Sci. 3382: xi + 100 p. https://publications.gc.ca/collections/collection_2021/mpo-dfo/Fs97-6-3382-eng.pdfCite this data as: Serdynska, A.R., Pardy, G.S., and King, M.C. Data of: Offshore Ecological and Human Use Information considered in Marine Protected Area Network Design in the Scotian Shelf Bioregion. Published: January 2022. Fisheries and Oceans Canada, Dartmouth, N.S. https://open.canada.ca/data/en/dataset/2d9cce9a-d634-4b49-879f-87c40c52acf2

The Coastal Environmental Baseline Program is a multi-year Fisheries and Oceans Canada initiative designed to work with Indigenous and local communities and other key parties to collect coastal environmental data at a series of sites across Canada, to build a better understanding of existing marine ecological conditions. The program began data collection in 2019, and with the onset of Phase 2 in 2023, the Maritimes region study area was expanded and renamed ‘Northwest Fundy Shores’. A physical oceanography program was designed to align with the oceanographic interests and data needs of local interest holders. Starting in 2023, oceanographic parameters including water temperature, salinity, depth and turbidity have been monitored at a series of locations in Passamaquoddy Bay, the St. Croix River, and along the Bay of Fundy coast, including the Musquash estuary Marine Protected Area (MPA). This dataset includes seasonal CTD (conductivity, temperature and depth) and turbidity data starting in spring 2023. Instruments are maintained through the winter months at a limited number of sites. Data collection methods are primarily moored instruments on the bottom in water depths of 5-90 meters, and a few buoyant surface floats. Overall, this dataset captures seasonal dynamics in near-shore marine environments in Passamaquoddy Bay, the St Croix River, the Bay of Fundy and the Musquash MPA. Cite this data as: Coastal Environmental Baseline Program (Maritimes Region), Northwest Fundy Shores conductivity, temperature and depth data. Published in May 2025. Coastal Environmental Baseline Program. Coastal Ecosystems Science Division, Fisheries and Oceans Canada, St. Andrews, N.B. 14-02-2025

PURPOSE:Eastern Beaufort Sea beluga whales form one of the largest summering aggregations of the species in the Mackenzie Estuary. In 2010, the Tarium Niryutait Marine Protected Area (TNMPA) was designated to protect beluga whales and their habitats As a part of ongoing ecological monitoring efforts in the TN MPA, passive acoustic monitoring (PAM) was implemented in 2011 to act as continuous monitoring method, filling the temporal gaps associated with historical aerial surveys. Beginning in 2014, PAM effort increased each year, and oceanographic sensors were added to moorings to (1) better understand oceanographic conditions within the TN MPA and (2) examine the environmental parameters that drive beluga movement and habitat use patterns within the estuary. Several studies using this dataset have been completed, and others are ongoing. However, much more can be done with the acoustic and environmental data. The purpose of this report is to outline deployment methods and instrument settings for moorings to support the full use of the data collected. DESCRIPTION:Each summer, Eastern Beaufort Sea beluga whales form one of the largest aggregations of the species in the Mackenzie Estuary. In 2010, the Tarium Niryutait Marine Protected Area (TNMPA) was designated in the estuary to protect beluga whales and their habitats. As a part of ongoing ecological monitoring efforts in the TN MPA, passive acoustic monitoring (PAM) was implemented in 2011 to act as continuous monitoring method, filling the temporal gaps associated with historical aerial surveys. Beginning in 2014, PAM effort increased each year, and oceanographic sensors were added to each PAM mooring to (1) better understand oceanographic conditions (i.e., temperature, salinity, turbidity, and wave conditions) within the TN MPA and (2) to examine the environmental parameters that drive beluga movement and habitat use patterns within the estuary. Moorings have been deployed with varying configurations of oceanographic sensors in Kugmallit Bay since 2015, but typically record water temperature, salinity, depth, and wave conditions. In 2018, the program was expanded to the Niaqunnaq parcel of the MPA (Shallow Bay), and in 2021 it was expanded again to the Okeevik parcel of the MPA. These observatories have provided new knowledge about drivers of beluga habitat use in the TN MPA, in particular in Kittigaryuit, but more recently in Niaqunnaq and Okeevik.

Basic biological data for all fish caught during the 2012 BSMFP expedition. Includes identification, weight, length (total, fork, and, standard), liver weight, gonad weight, sex and maturity level.

Marine classification schemes based on abiotic surrogates often inform regional marine conservation planning in lieu of detailed biological data. However, theses chemes may poorly represent ecologically relevant biological patterns required for effective design and management strategies. We used a community-level modeling approach to characterize and delineate representative mesoscale (tens to thousands of kilometers) assemblages of demersal fish and benthic invertebrates in the North-west Atlantic. Hierarchical clustering of species occurrence data from four regional annual multispecies trawl surveys revealed three to six groupings (predominant assemblage types) in each survey region, broadly associated with geomorphic and oceanographic features. Indicator analyses identified 3–34 emblematic taxa of each assemblage type. Random forest classifications accurately predicted assemblage dis-tributions from environmental covariates (AUC > 0.95) and identified thermal limits (annual minimum and maximum bottom temperatures) as important pre-dictors of distribution in each region. Using forecasted oceanographic conditions for the year 2075 and a regional classification model, we projected assemblage dis-tributions in the southernmost bioregion (Scotian Shelf-Bay of Fundy) under ahigh emissions climate scenario (RCP 8.5). Range expansions to the north eastare projected for assemblages associated with warmer and shallower waters of the Western Scotian Shelf over the 21st century as thermal habitat on the rela-tively cooler Eastern Scotian Shelf becomes more favorable. Community-level modeling provides a biotic-informed approach for identifying broadscale ecolog-ical structure required for the design and management of ecologically coherent, representative, well-connected networks of Marine Protected Areas. When com-bined with oceanographic forecasts, this modeling approach provides a spatial tool for assessing sensitivity and resilience to climate change, which can improve conservation planning, monitoring, and adaptive management.Cite this data as: O'Brien, J.M., Stanley, R.R.E., Jeffery, N.W., Heaslip, S.W., DiBacco, C., and Wang, Z. Demersal fish and benthic invertebrate assemblages in the Northwest Atlantic.Published: December 2024. Coastal Ecosystems Science Division, Maritimes region, Fisheries and Oceans Canada, Dartmouth NS.https://open.canada.ca/data/en/dataset/14d55ea5-b17d-478c-b9ee-6a7c04439d2b

Since 2005, Fisheries and Oceans Canada has been collecting monitoring data for aquatic invasive species (e.g. https://open.canada.ca/data/en/dataset/8d87f574-0661-40a0-822f-e9eabc35780d, https://open.canada.ca/data/en/dataset/503a957e-7d6b-11e9-aef3-f48c505b2a29, https://open.canada.ca/data/en/dataset/8661edcf-f525-4758-a051-cb3fc8c74423). This monitoring data, as well additional occurrence information from online databases and the scientific literature, have been paired with high resolution environmental data and oceanographic models in species distribution models that predict the present-day and future potential distributions of 12 moderate to high risk invasive species on Canada’s east and west coasts. Future distributions were predicted for 2075, under Representative Concentration Pathway 8.5 from the Intergovernmental Panel on Climate Change’s fifth Assessment Report. Present-day and future richness of these species (i.e., hotspots) has also been estimated by summing their occurrence probabilities. This data set includes the occurrence locations of each species, the present-day and future species distribution modeling results for each species, and the estimated species richness. This research has been published in the scientific literature(Lyons et al. 2020).Lyons DA, Lowen JB, Therriault TW, Brickman D, Guo L, Moore AM, Peña MA, Wang Z, DiBacco C. (In Press) Identifying Marine Invasion Hotspots Using Stacked Species Distribution Models. Biological InvasionsCite this data as: Lyons DA., Lowen JB, Therriault TW., Brickman D., Guo L., Moore AM., Peña MA., Wang Z., DiBacco C. Data of: Species distribution models and occurrence data for marine invasive species hotspot identification. Published: November 2020. Coastal Ecosystems Science Division, Fisheries and Oceans Canada, Dartmouth, N.S. https://open.canada.ca/data/en/dataset/1bbd5131-8b34-4245-b999-3b4c4259d74f