The Steller sea lion (Eumetopias jubatus) is the largest of all sea lions and enjoys a lifespan of up to thirty years. In Canada, the Steller can be spotted along the rocky coast of British Columbia. These highly mobile marine mammals typically travel alone or in small groups, but they congregate in large numbers at traditional rookeries and haul-outs during the mating and pupping season. The population was severely depleted in Canada but following its protection in 1970, the size of the adult population has more than doubled.The survey targeted Steller sea lions and sites were chosen based on knowledge of historically occupied rookeries and haul-out sites with nearby areas monitored for potential shifts in distribution. This dataset contains counts that have been collected from sightings of individuals in the 2016/2017 survey season.

Marine protected areas (MPAs) are one among a number of spatial management tools, and are defined as areas that are established for the long-term, and managed through legal or other effective means, to achieve the long-term conservation of nature with associated ecosystem services and cultural values.Currently, Fisheries and Oceans Canada has a number of MPAs designated under the Oceans Act and Areas of Interest for new MPAs at various stages of progress towards designation. These areas are ecologically significant, with species and/or features that require special management consideration.  An Oceans Act MPA can be established for any of the six conservation purposes outlined in the Act:• The conservation and protection of commercial and non-commercial fishery resources, including marine mammals, and their habitats;  • The conservation and protection of endangered or threatened marine species, and their habitats;  • The conservation and protection of unique habitats;  • The conservation and protection of marine areas of high biodiversity or biological productivity; • The conservation and protection of any other marine resource or habitat as is necessary to fulfill the mandate of the Minister; and• The conservation and protection of marine areas for the purposes of maintaining ecological integrity

Records of marine mammal sightings (N = 5,324) collected by ASOs and submitted to Fisheries and Oceans Canada (DFO) between 1979-2024, across three DFO regions: the Arctic, Newfoundland and Labrador, and the Maritimes. Methods for initial data compilation are provided in the associated technical report "Marine mammal records collected by the at-sea observer (ASO) program in Arctic, Newfoundland and Labrador, and Maritimes regions: a summary of challenges and opportunities for future research." Cite this data as: Feyrer, L.J., Colbourne, N., Lawson, J.W., Moors-Murphy, H.B., Ferguson, S. Dataset update to Marine mammal records collected by the At-Sea Observer program in Arctic, Newfoundland and Labrador and Maritimes regions. Published: February 2025. Ocean Ecosystems Science Division, Fisheries and Oceans Canada, Dartmouth, N.S.

This shapefile dataset was designed using polygons extracted from the Cartography of Coastal Ecosystems of Maritime Quebec geodatabase (2022, Laboratory for Dynamics and Integrated Management of Coastal Zones, Fisheries and Oceans Canada), described in the paragraph below. It consists of polygons with eelgrass and incorporates attributes describing the vegetation cover, the composition of the seagrass beds, the associated ecosystem name, the imagery data that allowed photo-interpretation and the presence or absence of field data. A unique sequence number associated with each polygon makes it possible to trace the paired polygon of the geodatabase of coastal ecosystems to attribute values not detailed in this shapefile. The study area includes all of the estuarine and maritime coasts of Quebec, with the exception of certain sectors, including most of the Lower North Shore and Anticosti Island, with the exception of villages of Kegaska, la Romaine, Chevery, Blanc-Sablon and Port-Menier. Some islands off the estuary and gulf coasts are part of the region covered, such as Île d'Orléans, Isle-aux-Coudres, Île Verte and Île Bonaventure.The Mapping of Coastal Ecosystems of Maritime Quebec was carried out jointly by the Laboratory for Dynamics and Integrated Coastal Zone Management (LDGIZC) of the University of Quebec at Rimouski as part of the Coastal Resilience Project; and by the Fisheries and Oceans Canada team, as part of the Integrated Marine Response Planning Program (IMRP). A classification of coastal ecosystems was carried out on more than 4,200 km of coastal corridor, focusing on estuarine and maritime coasts of Quebec located between the limit of the upper foreshore and the shallow infralittoral (about 10m deep). The mapping method developed is based on semi-automated segmentation and a photo-interpretation of coastal ecosystems, using very high resolution multispectral photographs (RBVI) acquired between 2015 and 2020 by DFO. The classification of polygons is based on the assignment of predefined value classes for the biological and physical attributes under study (e.g., substrates, plant type, vegetation cover, geosystem, etc. ). Helicopter-born oblique photographs and field data helped to reduce the uncertainty associated with photo-interpretation. UQAR and DFO conducted field sampling campaigns targeting the mediolittoral (4,390 stations) and the lower mediolittoral and infralittoral zones (2,959 stations), respectively , which validated some of the attributes identified by photo-interpretation and provided detailed information on community structure . The geodatabase of the Mapping of coastal ecosystems is hosted and managed by UQAR on their SIGEC-Web cartographic platform: https://ldgizc.uqar.ca/Web/sigecwebCredits © DFO (2023, Fisheries and Oceans Canada)Provencher-Nolet, L., Paquette, L., Pitre, L.D., Grégoire, B. and Desjardins, C. 2024. Cartographie des macrophytes estuariens et marins du Québec. Rapp. Tech. Can. Sci. halieut. Aquat. 3617 : v + 99 p.Grégoire, B., Pitre, L.D., Provencher-Nolet, L., Paquette, L. and Desjardins, C. 2024. Distribution d’organismes marins de la zone côtière peu profonde du Québec recensés par imagerie sous-marine de 2017 à 2021. Rapp. tech. can. sci. halieut. aquat. 3616 : v + 78 p.Grégoire, B. 2022. Biodiversité du relevé côtier Planification pour une intervention environnementale intégrée dans l’estuaire et le golfe du Saint-Laurent (2017–2021). Observatoire global du Saint-Laurent. [Jeu de données]Jobin, A., Marquis, G., Provencher-Nolet, L., Gabaj Castrillo. M. J., Trubiano C., Drouet, M., Eustache-Létourneau, D., Drejza, S. Fraser, C. Marie, G. et P. Bernatchez (2021) Cartographie des écosystèmes côtiers du Québec maritime — Rapport méthodologique. Chaire de recherche en géoscience côtière, Laboratoire de dynamique et de gestion intégrée des zones côtières, Université du Québec à Rimouski. Rapport remis au ministère de l’Environnement et de la Lutte contre les changements climatiques, septembre 2021, 98 p.

Species characterization by environmental DNA (eDNA) is a method that allows the use of DNA released into the environment by organisms from various sources (secretions, faeces, gametes, tissues, etc.). It is a complementary tool to standard sampling methods for the identification of biodiversity. This project provides a list of fish and marine mammal species whose DNA has been detected in water samples collected between 2019 and 2021 using the mitochondrial marker MiFish (12S).The surveys were carried out in the summer of 2019 (July 14-18) and (July 30 - August 5), in the fall of 2020 (October 27-28) and in the summer-fall of 2021 (May 31 - June 3 ) and (August 24-25) between Forestville and Godbout (Haute-Côte-Nord). Sampling was carried out between 1-50 meters depth in 91 stations, with 1 to 3 replicates per station. Two liters of water were filtered through a 1.2 µm fiberglass filter. DNA extractions were performed with the DNeasy Blood and Tissues or PowerWater extraction kit (Qiagen). Negative field, extraction and PCR controls were added at the different stages of the protocol. The libraries were prepared either by Génome Québec (2019, 2020) or by the Genomics Laboratory of the Maurice-Lamontagne Institute (2021), then sequenced on a NovaSeq 4000 PE250 system by Génome Québec. The bioinformatics analysis of the sequences obtained was carried out using an analysis pipeline developed in the genomics laboratory. A first step made it possible to obtain a table of molecular operational taxonomic units (MOTU) using the cutadapt software for the removal of the adapters and the R package DADA2 for the filtration, the fusion, removal of chimeras and compilation of data. The MOTUs table was then corrected using the R package metabaR to eliminate the tag-jumping and take contaminants into consideration. Samples showing a strong presence of contaminating MOTUs were removed from the dataset. The MOTUs were also filtered to remove all remaining adapter sequences and also retain only those of the expected size (around 170 bp). Finally, taxonomic assignments were made on the MOTUs using the BLAST+ program and the NCBI-nt database. Taxonomic levels (species, genus or family) were assigned using a best match method (Top hit), with a threshold of 95%. Only assignments at the level of fish and marine mammals were considered, and the taxa detected were compared to a list of regional species, and corrected if necessary. The species detections of the different replicas have been combined.The file provided includes generic activity information, including site, station name, date, marker type, assignment types used for taxa identification, and a list of taxa or species. The list of taxa has been verified by a biodiversity expert from the Maurice-Lamontagne Institute.This project was funded by Fisheries and Oceans Canada's Coastal Environmental Baseline Data Program under the Oceans Protection Plan. This initiative aims to acquire baseline environmental data that contributes to the characterization of significant coastal areas and supports evidence-based assessments and management decisions to preserve marine ecosystems.Data were also published on SLGO platform : https://doi.org/10.26071/ogsl-2239bca5-c24a

11 tagged Blue whales (Balaenoptera musculus) were tracked during the daytime movements as well as the feeding behaviour in the St. Lawrence River estuary. Kernel density was applied to derminate the high density feeding areas of all individuals combined (30, 40, 50, 60, 75, 95 %).Doniol-Valcroze T, Lesage V, Giard J, Michaud R, 2012. Challenges in marine mammal habitat modelling: evidence of multiple foraging habitats from the identification of feeding events in blue whales. Endang Species Res, Vol. 17 : 255–268, doi : 10.3354/esr00427(English version only)

PURPOSE:In this study, we examined the structure and function of the Southampton Island marine food web across 149 species of benthic and pelagic invertebrates, fishes, marine mammals and seabirds collected from 2016 to 2019, to provide a baseline for future studies that aim to quantify temporal changes in food web structuring. More specifically,we used a multi-biomarker approach combining stable isotopes and HBIs to: (i) determine the vertical trophic structure of the marine food web, (ii) investigate the contribution of benthic and pelagic-derived prey to the higher trophic level species of the Arctic food web, and (iii) determine the role of ice algae and phytoplankton carbon source use across different trophic levels and compartments (pelagic and benthic). By shedding new light on the functioning of the Southampton Island food web and specifically how the contribution of ice algae and benthic habitat shapes its structure, these results will be relevant to adaptive management and conservation initiatives implemented in response to anthropogenic stressors and climate change. DESCRIPTION:Climate-driven alterations of the marine environment are most rapid in Arctic and subarctic regions, including Hudson Bay in northern Canada, where declining sea ice, warming surface waters and ocean acidification are occurring at alarming rates. These changes are altering primary production patterns that will ultimately cascade up through the food web. Here, we investigated (i) the vertical trophic structure of the Southampton Island marine ecosystem in northern Hudson Bay, (ii) the contribution of benthic and pelagic-derived prey to the higher trophic level species, and (iii) the relative contribution of ice algae and phytoplankton derived carbon in sustaining this ecosystem. For this purpose, we measured bulk stable carbon, nitrogen and sulfur isotope ratios as well as highly branched isoprenoids in samples belonging to 149 taxa, including invertebrates, fishes, seabirds and marine mammals. We found that the benthic invertebrates occupied 4 trophic levels and that the overall trophic system went up to an average trophic position of 4.8. The average δ34S signature of pelagic organisms indicated that they exploit both benthic and pelagic food sources, suggesting there are many interconnections between these compartments in this coastal area. The relatively high sympagic carbon dependence of Arctic marine mammals (53.3 ± 22.2 %) through their consumption of benthic invertebrate prey, confirms the important role of the benthic subweb for sustaining higher trophic level consumers in the coastal pelagic environment. Therefore, a potential decrease in the productivity of ice algae could lead to a profound alteration of the benthic food web and a cascading effect on this Arctic ecosystem.Collaborators:Centre for Earth Observation Science, University of Manitoba, Winnipeg, Manitoba, Canada - R´emi Amiraux, C.J. Mundy, Jens K. Ehn, Z.A. Kuzyk.Quebec-Ocean, Sentinel North and Takuvik, Biology Department, Laval University, Quebec, Quebec, Canada - Marie Pierrejean.Scottish Association for Marine Science, Oban, UK - Thomas A. Brown.Department of Natural Resource Sciences, McGill University, Ste. Anne de Bellevue, Quebec, Canada - Kyle H. Elliott.Department of Biological Sciences, University of Manitoba, Winnipeg, Manitoba, Canada - Steven H. Ferguson, Cory J.D. Matthews, Cortney A. Watt, David J. Yurkowski.School of the Environment, University of Windsor, Windsor, Ontario, Canada - Aaron T. Fisk.Science and Technology Branch, Environment and Climate Change Canada, Ottawa, Ontario, Canada - Grant Gilchrist.College of Fisheries and Ocean Sciences, University of Alaska Fairbanks, Fairbanks, AK, USA - Katrin Iken.Department of Earth Sciences, University of New Brunswick, Fredericton, NB, Canada - Audrey Limoges.Department of Integrative Biology, University of Windsor, Windsor, Ontario, Canada - Oliver P. Love, Wesley R. Ogloff.Department of Arctic Biology, The University Centre in Svalbard, Longyearbyen, Norway - Janne E. Søreide.

In 2016-17, DFO Maritimes Region undertook a Marine Protected Area (MPA) network analysis for the Scotian Shelf-Bay of Fundy Bioregion. The analysis considered available bioregional-scale ecological and human use data in an effort to identify a draft MPA network design that would protect biodiversity while minimizing any potential impacts on commercial fishing and other industries. The data layers used for the offshore component of the MPA network analysis are provided here. These layers are not presented in their original forms and were modified (e.g. clipped, reclassified, etc.) specifically for use in the MPA network analysis. They should not be used for any other purpose. Please see Serdynska et al. 2021 for details on how each layer was created.Serdynska, A.R., Pardy, G.S., and King, M.C. 2021. Offshore Ecological and Human Use Information considered in Marine Protected Area Network Design in the Scotian Shelf Bioregion. Can. Tech. Rep. Fish. Aquat. Sci. 3382: xi + 100 p. https://publications.gc.ca/collections/collection_2021/mpo-dfo/Fs97-6-3382-eng.pdfCite this data as: Serdynska, A.R., Pardy, G.S., and King, M.C. Data of: Offshore Ecological and Human Use Information considered in Marine Protected Area Network Design in the Scotian Shelf Bioregion. Published: January 2022. Fisheries and Oceans Canada, Dartmouth, N.S. https://open.canada.ca/data/en/dataset/2d9cce9a-d634-4b49-879f-87c40c52acf2

Marine classification schemes based on abiotic surrogates often inform regional marine conservation planning in lieu of detailed biological data. However, theses chemes may poorly represent ecologically relevant biological patterns required for effective design and management strategies. We used a community-level modeling approach to characterize and delineate representative mesoscale (tens to thousands of kilometers) assemblages of demersal fish and benthic invertebrates in the North-west Atlantic. Hierarchical clustering of species occurrence data from four regional annual multispecies trawl surveys revealed three to six groupings (predominant assemblage types) in each survey region, broadly associated with geomorphic and oceanographic features. Indicator analyses identified 3–34 emblematic taxa of each assemblage type. Random forest classifications accurately predicted assemblage dis-tributions from environmental covariates (AUC > 0.95) and identified thermal limits (annual minimum and maximum bottom temperatures) as important pre-dictors of distribution in each region. Using forecasted oceanographic conditions for the year 2075 and a regional classification model, we projected assemblage dis-tributions in the southernmost bioregion (Scotian Shelf-Bay of Fundy) under ahigh emissions climate scenario (RCP 8.5). Range expansions to the north eastare projected for assemblages associated with warmer and shallower waters of the Western Scotian Shelf over the 21st century as thermal habitat on the rela-tively cooler Eastern Scotian Shelf becomes more favorable. Community-level modeling provides a biotic-informed approach for identifying broadscale ecolog-ical structure required for the design and management of ecologically coherent, representative, well-connected networks of Marine Protected Areas. When com-bined with oceanographic forecasts, this modeling approach provides a spatial tool for assessing sensitivity and resilience to climate change, which can improve conservation planning, monitoring, and adaptive management.Cite this data as: O'Brien, J.M., Stanley, R.R.E., Jeffery, N.W., Heaslip, S.W., DiBacco, C., and Wang, Z. Demersal fish and benthic invertebrate assemblages in the Northwest Atlantic.Published: December 2024. Coastal Ecosystems Science Division, Maritimes region, Fisheries and Oceans Canada, Dartmouth NS.https://open.canada.ca/data/en/dataset/14d55ea5-b17d-478c-b9ee-6a7c04439d2b

PURPOSE:Eastern Beaufort Sea beluga whales form one of the largest summering aggregations of the species in the Mackenzie Estuary. In 2010, the Tarium Niryutait Marine Protected Area (TNMPA) was designated to protect beluga whales and their habitats As a part of ongoing ecological monitoring efforts in the TN MPA, passive acoustic monitoring (PAM) was implemented in 2011 to act as continuous monitoring method, filling the temporal gaps associated with historical aerial surveys. Beginning in 2014, PAM effort increased each year, and oceanographic sensors were added to moorings to (1) better understand oceanographic conditions within the TN MPA and (2) examine the environmental parameters that drive beluga movement and habitat use patterns within the estuary. Several studies using this dataset have been completed, and others are ongoing. However, much more can be done with the acoustic and environmental data. The purpose of this report is to outline deployment methods and instrument settings for moorings to support the full use of the data collected. DESCRIPTION:Each summer, Eastern Beaufort Sea beluga whales form one of the largest aggregations of the species in the Mackenzie Estuary. In 2010, the Tarium Niryutait Marine Protected Area (TNMPA) was designated in the estuary to protect beluga whales and their habitats. As a part of ongoing ecological monitoring efforts in the TN MPA, passive acoustic monitoring (PAM) was implemented in 2011 to act as continuous monitoring method, filling the temporal gaps associated with historical aerial surveys. Beginning in 2014, PAM effort increased each year, and oceanographic sensors were added to each PAM mooring to (1) better understand oceanographic conditions (i.e., temperature, salinity, turbidity, and wave conditions) within the TN MPA and (2) to examine the environmental parameters that drive beluga movement and habitat use patterns within the estuary. Moorings have been deployed with varying configurations of oceanographic sensors in Kugmallit Bay since 2015, but typically record water temperature, salinity, depth, and wave conditions. In 2018, the program was expanded to the Niaqunnaq parcel of the MPA (Shallow Bay), and in 2021 it was expanded again to the Okeevik parcel of the MPA. These observatories have provided new knowledge about drivers of beluga habitat use in the TN MPA, in particular in Kittigaryuit, but more recently in Niaqunnaq and Okeevik.