The Coastal Ice Ocean Prediction System (CIOPS) provides a 48 hour ocean and ice forecast over different domains (East, West, Salish Sea) four times a day at 1/36° resolution. A pseudo-analysis component is forced at the ocean boundaries by the Regional Ice Ocean Prediction System (RIOPS) forecasts and spectrally nudged to the RIOPS solution in the deep ocean. Fields from the pseudo-analysis are used to initialize the 00Z forecast, whilst the 06, 12 and 18Z forecasts use a restart files saved at hour 6 from the previous forecast. The atmospheric fluxes for both the pseudo-analysis and forecast components are provided by the High Resolution Deterministic Prediction System (HRDPS) blended both spatially and temporally with either the Global Deterministic Prediction System (GDPS) (for CIOPS-East) or an uncoupled component of the Global Deterministic Prediction System (GDPS) at 10km horizontal resolution (for CIOPS-West) for areas not covered by the HRDPS.

This dataset contains the modelled and observed data used in the publication "Fjord circulation permits persistent subsurface water mass in a long, deep mid-latitude inlet" by Laura Bianucci et al., DFO Ocean Sciences Division, Pacific Region (published in the journal Ocean Science in 2024). An application of the Finite Volume Community Ocean Model (FVCOM v4.1) was run from May 24 to June 27, 2019 in the Discovery Islands region of British Columbia, Canada. Observed temperature and salinity profiles available in this area during this time period are included in the dataset, along with the modelled values at the same times and locations.

Monthly mean salinity from Bedford Institute of Oceanography North Atlantic Model (BNAM) results were averaged over 1990 to 2015 period to create monthly mean climatology for the Northwest Atlantic Ocean, which can be considered as a representation of the climatological state of the Northwest Atlantic Ocean. The BNAM model is eddy-resolving, NEMO-based ice-ocean coupled North Atlantic Ocean model developed at the Bedford Institute of Oceanography (BIO) to support DFO monitoring programs. The data available here is monthly climatology for eight selected depths (surface, 110 m, 156 m, 222 m, 318 m, 541 m, 1062 m, bottom) in 1/12 degree spatial resolution. The data for each month from 1990 until present for the entire model domain ( 8°–75°N latitude and 100°W–30°E longitude) and various depths is available upon request.The 1990-2017 model hindcast result is compared with observational data from surface drifter and satellite altimetry. The model demonstrates good skill in simulating surface currents, winter convection events in the Labrador Sea, and the Atlantic Meridional Overturning Circulation as observed at 26.5°N and 41°N. Model results have been used to interpret changes in the Labrador Current and observed warming events on the Scotian Shelf, and are reported through the annual AZMP Canadian Science Advisory Secretariat Process.When using data please cite following:Wang, Z., Lu, Y., Greenan, B., Brickman, D., and DeTracey, B., 2018. BNAM: An eddy resolving North Atlantic Ocean model to support ocean monitoring. Can. Tech. Rep. Hydrogr. Ocean. Sci. 327: vii + 18p

The Ocean Data Inventory database is an inventory of all of the oceanographic time series data held by the Ocean Science Division at the Bedford Institute of Oceanography. The data archive includes about 5800 current meter and acoustic doppler time series, 4500 coastal temperature time series from thermographs, as well as a small number (200) of tide gauges. Many of the current meters also have temperature and salinity sensors. The area for which there are data is roughly defined as the North Atlantic and Arctic from 30° - 82° N, although there are some minor amounts of data from other parts of the world. The time period is from 1960 to present. The database is updated on a regular basis.

This dataset contains the surface temperature and salinity data of the enlarged coastal thermograph network of the St. Lawrence river, estuary and gulf system. It includes data from the Canadian Hydrographic Service water level network (SINECO), the Department of Fisheries and Oceans (DFO)-Quebec long-termed thermograph monitoring program network and the oceanographic buoy network.Each station is linked with a .png file showing the temperature and salinity time series and with a .csv file containing the surface temperature and salinity data themselves (columns : Station,Latitude,Longitude,Date(UTC),Depth/Profondeur(m),Temperature/Température(ºC),Salinity/Salinité(psu)).Supplemental InformationA detailed description of the networks (SINECO, oceanographic buoys and the DFO-Quebec thermograph monitoring program) is available at the St. Lawrence Global Observatory (SLGO) portal :SINECO : https://ogsl.ca/en/tide-gauges-dfo-chs/Oceanographic buoys : https://ogsl.ca/en/marine-conditions-buoys-dfo/Thermographs: https://ogsl.ca/en/marine-conditions-thermographs-dfo/Technical Reports related to the Thermograph Network (the last one is also available at the same hypertext link mentionned above) :Pettigrew, B., Gilbert, D. and Desmarais R. 2016. Thermograph network in the Gulf of St. Lawrence. Can. Tech. Rep. Hydrogr. Ocean Sci. 311: vi + 77 p.Pettigrew, B., Gilbert, D. and Desmarais R. 2017. Thermograph network in the Gulf of St. Lawrence: 2014-2016 update. Can. Tech. Rep. Hydrogr. Ocean Sci. 317: vii + 54 p.

We evaluated an autonomous environmental DNA sampler produced by Dartmouth Ocean Technologies Inc (Dartmouth, Canada) compared to time-at-sample filtration in the laboratory to determine the performance of moored samplers for monitoring in the marine world. We deployed three autonomous samplers from DOT in the Bedford Basin (Canada) over a nine-week period in summer/fall 2023. The samplers filtered seawater in situ at programmed interviews over this time period, and we collected contemporaneous samples with a standard vacuum pump during each sampling period. Both eDNA sample types captured similar fish diversity, including typical diversity for the Northwest Atlantic. The invertebrate community detected using the COI marker was different between each sample type, likely due to differences in filter pore size. We found biofouling on the moored samplers was minimal over the study period, even in a high-traffic area such as the Bedford Basin, likely due to the relatively short experimental period, and copper screening covering in the inlet and outlet valves of the instruments. Overall, our results show promise to deploy autonomous eDNA samplers in marine conservation areas to contribute to monitoring in the temperate ocean, but further testing over longer periods of time is needed to determine if DNA remains well-preserved in the autonomous samplers at ambient ocean temperatures.Cite this data as: Jeffery, N.W., Van Wyngaarden, M., and Stanley, R.R.E. Evaluating an Autonomous eDNA Sampler for Marine Environmental Monitoring: Short- and Long-Term Applications. Published: December 2024. Coastal Ecosystems Science Division, Maritimes Region, Fisheries and Oceans Canada, Dartmouth NS.

This record contains results from chemical analysis including suspended nitrogen (mg/g), suspended carbon (mg/g), and phosphorus (mg/g) based on dry weight sediment samples collected in the Beaufort Sea.

Moored instrument time series data include current velocity, temperature, salinity, oxygen, fluorescence, transmissivity, turbidity, and particle capture of carbon, nitrogen, and silicon as well as sediment trap, ice drift and ice draft data.These data were collected by researchers from the Institute of Ocean Sciences, Sidney, BC, from locations ranging from the North Pacific, the Beaufort Sea, and across the Canadian Arctic Archipelago to Baffin Bay.

Moored instrument time series data include current velocity, temperature, salinity, oxygen, fluorescence, transmissivity, turbidity, sediment trap data and particle capture of carbon, nitrogen, and silicon.These data were collected by researchers from the Institute of Ocean Sciences, Sidney, BC, from locations in the North Pacific.The data links below are only a representative sample of the entire collection. If you require more data, please send your request to the data contact.

Description:In the coming decades, warming and deoxygenation of marine waters are anticipated to result in shifts in the distribution and abundance of fishes, with consequences for the diversity and composition of fish communities. Here, we combine fisheries-independent trawl survey data spanning the west coast of the USA and Canada with high-resolution regional ocean models to make projections of how 34 groundfish species will be impacted by changes in temperature and oxygen in British Columbia (BC) and Washington. In this region, species that are projected to decrease in occurrence are roughly balanced by those that are projected to increase, resulting in considerable compositional turnover. Many, but not all, species are projected to shift to deeper depths as conditions warm, but low oxygen will limit how deep they can go. Thus, biodiversity will likely decrease in the shallowest waters (less than 100 m), where warming will be greatest, increase at mid-depths (100–600 m) as shallow species shift deeper, and decrease at depths where oxygen is limited (greater than 600 m). These results highlight the critical importance of accounting for the joint role of temperature, oxygen and depth when projecting the impacts of climate change on marine biodiversity.The rasters available in this dataset project the occurrence of each of the 34 groundfish species in a 3 km^2 grid cell for the historical baseline, as well as for two emissions scenarios, from each of the two regional ocean models (BCCM and NEP36). Each projection layer is provided as the mean projected occurrence as well as the lower and upper 95% confidence interval of projected occurrence.Methods:Estimated species response curves:We estimated how the observed distribution of groundfish species is determined by temperature, dissolved oxygen and seafloor depth using data from fisheries-independent scientific research trawls spanning the entire American and Canadian west coast. We included data from 4 surveys (NOAA West Coast, NOAA Alaska, NOAA Bering or DFO Pacific) from 2000 to 2019. For each species, we modelled occurrences in the coastwide trawl dataset using a generalized linear model (GLM) using the sdmTMB package in R v. 4.0.2. The predictors were temperature, log dissolved oxygen, log depth and survey. We included quadratic terms for temperature and log depth to allow species occurrences to peak at intermediate values. We fitted a breakpoint function for log dissolved oxygen to reflect the fact oxygen is a limiting factor. We assessed the forecasting accuracy of the SDM by comparing how well a model fitted to only data from 2000 to 2010 could forecast species’ occurrences in trawls within our focal region for the period of 2011–2019. We assessed all 77 groundfish species that were present in the overall trawl dataset, however the final analysis included only the 34 species for which the models had adequate forecasting ability.Projecting groundfish biodiversity changes:We based our groundfish biodiversity change projections on two regional models that downscale climate projections: the British Columbia Continental Margin model (BCCM) and the North-Eastern Pacific Canadian Ocean Ecosystem model (NEP36-CanOE). We used a historical baseline of 1986–2005 and future projected values for 2046–2065 based on RCP 4.5 and 8.5 emissions scenarios. Using the models that we validated in our forecasting accuracy assessment, we projected the occurrence of each species in each 3 km^2 grid cell for the historical baseline, as well as for two emissions scenarios, from each of the two regional ocean models.Uncertainties:Source survey data was collected by consistent methods with survey-grade GPS for all years included. Data quality is expected to be high. Modeled data are at 3 km resolution. Outputs are as accurate as source input models and are deemed to be of high quality and accurate based upon the precision of model inputs.Projecting biodiversity responses to climate change involves considerable uncertainty and our approach allows us to quantify some aspects of this. Of the uncertainty that we could quantify, roughly half was due to uncertainty in our SDMs and the remainder was due to regional ocean model uncertainty or scenario uncertainty. This amount of uncertainty in the SDMs is typical, stemming from the fact that contemporary species distributions are also influenced by other factors that we have not included in our model. In addition, although oxygen demand is understood to vary with temperature, limitations in the implementation of breakpoint models prevented us from estimating a temperature-dependent oxygen breakpoint. However, although somewhat unrealistic, this limitation is unlikely to have greatly increased the uncertainty in our SDMs because low oxygen concentrations occurred almost exclusively at depths where temperature variation and projected change was small.To reduce uncertainty due to year-to-year variation in climate, our model projections are based on 20-year climatologies with a future period that is far enough ahead to ensure that changes are unambiguously due to greenhouse gases. We have made projections based on two different emissions scenarios, and two different regional ocean models that are both downscaled from the same global model, the second generation Canadian Earth System Model (CanESM2), using different downscaling techniques. While the BCCM model was run inter-annually and then averaged to produce the climatologies, the NEP36 model used atmospheric climatologies with augmented winds to force the ocean model and produce representative climatologies. Comparing these regional projections provides an estimate of the uncertainty across different regional downscaling models and methods. We find that the projected impacts of climate change on the groundfish community are more sensitive to the differences in the regional ocean models than they are to the emissions scenarios used. However, these differences are in magnitude (changes tend to be larger based on NEP36 compared with the BCCM) rather than in direction, with both models resulting in similar overall patterns of biodiversity change and turnover for the groundfish community. Over the 60-year time period (1986–2005 versus 2046–2065) used in our study, our projections suggest that groundfish community changes are similar regardless of the scenario used.