These data sets provide information pertaining to shrimp and bycatch estimates associated with beam-trawling and trapping (2001-2002) in Clio Channel. Data sets were compiled and formatted by Meagan Mak.Abstract from report:As part of a project investigating possible modification of marine ecosystems by shrimp trawling and trapping, we enumerated beam trawl and prawn trap catches at two locations in Clio Channel, south -central coast of British Columbia. Beam trawl surveys were conducted in Bones Bay and Turnour Bay during October 2001 and January 2002, respectively, and a prawn trap survey was conducted in Turnour Bay during March 2002. Catch data from the two gear types are presented.

These data sets provide information pertaining to abundant taxa including bottom-dwelling shrimp and fish along trawling and trapping transects in Simoom Sound at November, 2000, and February, 2001. Data sets were compiled and formatted by Meagan Mak.Abstract from report:This study is a component of a larger project designed to compare the effects of shrimp trawling and trapping gear on shrimp, fish and the benthic habitat of Simoom Sound located in Broughton Archipelago, British Columbia, Canada. Otter-trawling, beam-trawling, and trapping took place in three distinct experiment blocks of the central seabed of the Sound. In turn, each block consisted of replicate transects, where a towed submersible video-camera surveyed shrimp and fish before and after trawling. Video surveys were deployed only before trapping. From the video surveys, we determined the abundance of common shrimp taxa and fish.

These data sets provide information pertaining to shrimp and bycatch estimates associated with otter-trawling and trapping (November, 2000) and beam-trawling (February, 2001) in Simoom Sound. Data sets were compiled and formatted by Meagan Mak.Abstract from report:As part of a project investigating possible modification of marine ecosystems by shrimp trawling and trapping, we obtained information on catches offish, shrimp, prawns , and bycatch organisms as well as weight, sex ratios , egg location and colIateral damage to several species of pandalids and eualids. Focusing on the humpback shrimp (Pandalus hypsinotus), we assessed damage to the rostrum, carapace, abdomen, and tail fan on specimens caught by beam trawling, otter trawling, and trapping. Data are given from a preliminary study conducted in Northumberland Channel in June 2000 and more comprehensive sampling from Simoom Sound in November 2000 and February 2001.

These data sets provide information pertaining to epifauna taxa including bottom-dwelling shrimp and fish along trawling transects in Bones Bay and Turnour Bay between 2001 and 2002. Data sets were compiled and formatted by Meagan Mak.Abstract from the report:This study is a component of a larger project designed to assess potential effects of shrimp trawling gear on epifauna, shrimp, fish, and benthic habitat of Clio Channel located in Broughton Archipelago, British Columbia, Canada. Replicate beam-trawl surveys were carried out on individual transects in both Bones Bay and Turnour Bay located in the northern and southern portions of Clio Channel, respectively. A submersible, towed video-camera surveyed the seabed to enumerate epifauna and fish taxa before and after trawling activities. In regards to the video surveys, fish and epifauna (e.g. common shrimp) were observed across Clio Channel, while sea whips were predominate in the Turnour Bay video transects.

These datasets provide information pertaining to sediment grain size, porosity, organic content, total carbon and nitrogen concentrations, trace element concentrations, chlorophyll and phaeopigment concentrations, and meiofauna and macrofaunal abundance in Simoom Sound between November, 2000, and February, 2001. Data formatting of files were performed by Meagan Mak.Sutherland et al (2023) covers the benthic component of a broader project investigating potential modification of marine ecosystems by shrimp trawling and trapping on the central coast of British Columbia. Sediment and infaunal samples were collected before and after fishing with commercial fishing gear consisting of otter-trawl, beam-trawl, and trap-lines. Simoom Sound was sampled in November 2000 and February 2001. Tabulated data of sediment characteristics that include sediment grain size, porosity, carbon and nitrogen content, trace-element, and chlorophyll concentrations are presented in this report. In addition, the infaunal data are comprised of both macrofaunal and meiofaunal communities.

During the period of 1990 to 1993, Robin J. LeBrasseur and N. Brent Hargreaves led a juvenile salmon migration research project off the west coast of Vancouver Island BC. This included the development of surface beam trawl gear that could be deployed from a large trawl vessel (CCGS W.E. Ricker) and operated in an offshore environment. This dataset contains the research survey catch data and individual fish examinations data.

This resource documents a dataset of epifauna occurrences collected in 2021 during The Knowledge and Ecosystem-Based Approach in Baffin Bay (KEBABB) program developed by the Department of Fisheries and Oceans Canada (DFO) in collaboration with university partners. The overall objective of KEBABB is to characterize the variability and trends in physical, chemical, and biological oceanographic conditions and food webs supporting fisheries in the connected ecosystems of western Baffin Bay and Lancaster Sound. In 2021, DFO expanded the KEBABB program to Barrow Strait (KEBABS-Knowledge and Ecosystem-Based Approach in Barrow Strait), a key productive area of the Tallurutiup Imanga National Marine Conservation Area. The study took place in the Eastern Canadian Arctic (mainly in Baffin Bay, Davis Strait and Barrow Strait). Sampling is done along transects at fixed stations in the study area. Catches are collected with a 1.5 m Agassiz trawl (5 mm mesh net) for 3 minutes bottom-contact time at a target speed of 1.5 knots and with a 3 m benthic beam trawl (6.4 mm mesh net) for 15 minutes bottom-contact time at a target speed of 3 knots. A total of 16 stations were sampled for epifauna in 2021 between 85-850 m depth. Epibenthic invertebrates are identified to the lowest possible taxonomic level and photographed. All unknown specimens are frozen. In the lab, the identifications are validated or refined with the photos and the frozen specimens.The data are presented in Darwin Core and are separated in two files:The “Activité_épifaune_KEBABB_epifauna_event_en” file which contains information about missions, stations and deployments, which are presented under a hierarchical activity structure.The “Occurrence_épifaune_KEBABB_epifauna_en” file that contains the taxonomic occurrences.Further details on sampling can be found in the following report: Pućko, M., Charette, J., Tremblay P., Brulotte S., St-Denis B., Ciastek S., Hedges, K., Kuzyk, Z., Roy V., and Michel, C. 2022. An ecosystem-based approach in the eastern Arctic: KEBABB/S (Knowledge and Ecosystem-Based Approach in Baffin Bay/Barrow Strait) 2021 expedition report. Can. Manuscr. Rep. Fish. Aquat. Sci. 3250: viii + 58 p. https://publications.gc.ca/collections/collection_2022/mpo-dfo/Fs97-4-3250-eng.pdfUSE LIMITATION:To ensure scientific integrity and appropriate use of the data, we would encourage you to contact the data custodian.

This polygon dataset identifies the habitat suitability rating for Flammulated Owl (FLOW) within the Cariboo Natural Resource Region. The habitat suitability rating is based on Biogeoclimatic Ecosystem Classification (BEC), forest age class, crown closure, tree species, harvest activity, silviculture activity, slope and aspect.

Marine Protected Areas require comprehensive monitoring to ensure objectives are achieved; however, monitoring natural ecosystems at scale is challenged by the biodiversity it aims to measure. Environmental DNA (eDNA) metabarcoding holds promise to address this monitoring challenge. We conducted paired sampling at 54 sites for fish and invertebrate assemblages in the Northwest Atlantic using groundfish trawls and eDNA metabarcoding of benthic seawater using four genetic markers (12S rRNA, 16S rRNA, 18S rRNA, and CO1). Compared to trawling, eDNA detected similar patterns of species turnover, larger estimates of gamma diversity, and smaller estimates of alpha diversity. A total of 63.6% (42/66) of fish species captured by trawling were detected by eDNA, along with an additional 26 species. Of the 24 missed detections by eDNA, 12 were inevitable as they lacked reference sequences. Excluding taxa assigned to higher than species level and those without a species name, 23.6% (17/72) of invertebrate species captured by trawling were detected by CO1, which detected an additional 98 species. We demonstrate that eDNA is capable of detecting patterns of community assemblage and species turnover in an offshore environment, emphasizing its strong potential for a non-invasive, comprehensive, and scalable tool for biodiversity monitoring supporting marine conservation programmes.Cite this data as: Jeffery, N., Rubidge, E., Abbott, C., Westfall, K., Stanley, R. (2024): Data of: eDNA metabarcoding enriches traditional trawl survey data for monitoring biodiversity in the marine environment.Published: August 2024. Coastal Ecosystems Science Division, Fisheries and Oceans Canada, Dartmouth, N.S. https://open.canada.ca/data/en/dataset/43a91ba7-8025-4330-88db-db14022d729d

Species characterization by environmental DNA (eDNA) is a method that allows the use of DNA released into the environment by organisms from various sources (secretions, faeces, gametes, tissues, etc.). It is a complementary tool to standard sampling methods for the identification of biodiversity. This project provides a list of invertebrates species whose DNA has been detected in water samples collected at 2018 using the marker COI.The surveys were carried out in the summer of 2018 from August 11 to 14, between Forestville and Godbout (Haute-Côte-Nord). Sampling was carried out between 9-52 meters depth in 40 stations with one sample par station. Two liters of water were filtered through a 1.2 µm fiberglass filter. DNA extractions were performed with the DNeasy Blood and Tissue extraction kit (Qiagen). Negative field, extraction and PCR controls were added at the different stages of the protocol. Libraries at the COI locus were prepared by Genome Quebec and sequenced on an Illumina MiSeq PE250 system. The bioinformatics analysis of the sequences obtained was carried out using an in-house analysis pipeline as reported in Bourret et al. 2022. A first step made it possible to obtain a molecular operational taxonomic unit table (MOTU) using the cutadapt software for the removal of the adapters and the DADA2 R package for the filtration, fusion, chimera removal and data compilation. The MOTUs table was subsequently corrected by taking into account the negative controls, where the number of observations in the latter was removed from the linked samples. Singleton MOTUs have also been removed. Finally, the taxonomic assignments were carried out on the MOTUs using the IDTAXA classifier (present in the DECIPHIER R package) using a training set trained on the COI reference bank for Golf St-Laurent (GSL-rl v1.0, https://github.com/GenomicsMLI-DFO/MLI_GSL-rl) and a threshold of 40. Detections with an “Unreliable due to gaps” category were reported at the genus level only.The file provided includes generic activity information, including site, station name, date, marker type, assignment types used for taxa identification, and a list of taxa or species. The list of taxa has been verified by a biodiversity expert from the Maurice-Lamontagne Institute.This project was funded by Fisheries and Oceans Canada's Coastal Environmental Baseline Data Program under the Oceans Protection Plan. This initiative aims to acquire baseline environmental data that contributes to the characterization of significant coastal areas and supports evidence-based assessments and management decisions to preserve marine ecosystems.Data are also available on SLGO platform : https://doi.org/10.26071/ogsl-cd4c205b-f63b